HarveyLab / Acquisition2P_classLinks
For managing 2P imaging datasets from preprocessing to activity trace extraction
☆10Updated 6 years ago
Alternatives and similar repositories for Acquisition2P_class
Users that are interested in Acquisition2P_class are comparing it to the libraries listed below
Sorting:
- Bayesian learning and inference for state space models☆14Updated 4 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆56Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated 2 months ago
- Registration of cells across sessions.☆76Updated last year
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- Revealing neural correlates of behavior without behavioral measurements☆16Updated 6 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆15Updated 7 years ago
- NEW v1.1: https://github.com/dstolz/epsych_v1.1 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and sof…☆15Updated 3 years ago
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- a visualization method for neural data☆241Updated 10 months ago
- ☆24Updated 6 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Gallery of visualizations and analyses of the Allen Brain Observatory☆25Updated 3 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆52Updated 4 months ago
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- ☆18Updated last month
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆37Updated 7 years ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Region Of Interest Classification and Tracking☆27Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆39Updated 2 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- ☆60Updated 3 years ago
- cortex lab code for electrophysiology☆85Updated 2 years ago
- Histology processing☆72Updated last month
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- ☆41Updated 5 years ago