HarveyLab / Acquisition2P_classLinks
For managing 2P imaging datasets from preprocessing to activity trace extraction
☆10Updated 6 years ago
Alternatives and similar repositories for Acquisition2P_class
Users that are interested in Acquisition2P_class are comparing it to the libraries listed below
Sorting:
- ☆24Updated 5 years ago
- Bayesian learning and inference for state space models☆13Updated 3 years ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆35Updated 7 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆50Updated 2 years ago
- a visualization method for neural data☆235Updated 4 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 5 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆36Updated last year
- Tools to work with Allen Inst CCF data in matlab☆139Updated last month
- NEW v1.1: https://github.com/dstolz/epsych_v1.1 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and sof…☆15Updated 3 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 11 months ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 6 years ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 7 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆119Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- Gallery of visualizations and analyses of the Allen Brain Observatory☆25Updated 3 years ago
- Problem sets and materials for systems and computational neuroscience course☆16Updated 5 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- ☆58Updated 2 years ago
- Region Of Interest Classification and Tracking☆24Updated last week
- Code for internal lab sharing - polishing has started but is by no means complete☆129Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 4 months ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆71Updated 5 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆28Updated last year
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- ☆54Updated 5 months ago
- "Approaches to Study Neural Circuits" course☆66Updated 8 months ago
- Registration of cells across sessions.☆75Updated last year