MouseLand / suite2pLinks
cell detection in calcium imaging recordings
☆402Updated 2 weeks ago
Alternatives and similar repositories for suite2p
Users that are interested in suite2p are comparing it to the libraries listed below
Sorting:
- Tools to work with Allen Inst CCF data in matlab☆140Updated 2 months ago
- a visualization method for neural data☆236Updated 5 months ago
- Registration of cells across sessions.☆75Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 2 weeks ago
- Tools for processing 2P recordings☆127Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated last month
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- Histology processing☆69Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- Fast spike sorting with drift correction☆556Updated 2 weeks ago
- A curated list of awesome Neuropixels resources.☆110Updated last month
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆374Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆94Updated this week
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆685Updated last week
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆94Updated 10 months ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 9 months ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆644Updated this week
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- PYthon Neural Analysis Package☆320Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆120Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆62Updated 2 months ago
- GPU code for spike sorting☆186Updated last year
- cortex lab code for electrophysiology☆83Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- ☆52Updated last year