daharoni / Miniscope_AnalysisLinks
MATLAB analysis functions for Miniscope project.
☆19Updated 8 years ago
Alternatives and similar repositories for Miniscope_Analysis
Users that are interested in Miniscope_Analysis are comparing it to the libraries listed below
Sorting:
- Tools for processing 2P recordings☆130Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- Registration of cells across sessions.☆75Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Deconvolution of calcium imaging data☆101Updated 9 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Analysis package for miniscope data☆14Updated 2 years ago
- A package to analyse calcium imaging data recorded with the Miniscope.☆33Updated 3 years ago
- ☆41Updated 4 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Histology processing☆71Updated 2 months ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated 3 weeks ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- pyqt5 dependent applications for IBL sessions☆31Updated last month
- IBL core shared libraries☆64Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- a visualization method for neural data☆238Updated 7 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Region Of Interest Classification and Tracking☆27Updated this week
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆98Updated last week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…