zeqianli / tgvLinks
Explore 5,000+ genomes in the terminal. Light, blazing fast 🚀, vim-motion.
☆369Updated last week
Alternatives and similar repositories for tgv
Users that are interested in tgv are comparing it to the libraries listed below
Sorting:
- Align proteins to genomes with splicing and frameshift☆375Updated last week
- Genome browser and variant annotation☆365Updated this week
- GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered …☆194Updated last month
- Randomly subsample sequencing reads or alignments☆232Updated last week
- Download FASTQ files from SRA or ENA repositories.☆338Updated last month
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆423Updated 6 months ago
- Whole Genome Alignment Tools☆203Updated last month
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆172Updated this week
- Nanopore sequence read simulator☆274Updated 4 months ago
- Nanopore demultiplexing, QC and alignment pipeline☆204Updated 2 weeks ago
- diploid SNV caller for error-prone reads☆202Updated last year
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆222Updated last month
- a long read simulator that can imitate many types of read problems☆231Updated last year
- Tool for plotting sequencing data along genomic coordinates.☆296Updated 3 weeks ago
- SortMeRNA: next-generation sequence filtering and alignment tool☆271Updated last week
- Read alignment statistics for metagenomics☆358Updated this week
- GFF and GTF file manipulation and interconversion☆303Updated last year
- This Snakemake pipeline implements the GATK best-practices workflow☆255Updated 2 years ago
- FASTA/FASTQ pre-processing programs☆190Updated 3 years ago
- ☆201Updated 2 months ago
- A collection of genomics software tools written in Rust☆59Updated 2 weeks ago
- Nextflow training material☆184Updated this week
- Pipeline to fetch metadata and raw FastQ files from public databases☆177Updated 2 weeks ago
- Eukaryotic Genome Annotation Pipeline☆356Updated 2 weeks ago
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆234Updated last week
- A genome visualization python package for comparative genomics☆347Updated 2 months ago
- Bioinformatics Workbook repository☆187Updated 2 months ago
- A bioinformatics tool for working with modified bases☆204Updated last week
- An overview of all nanopack tools☆261Updated 2 years ago
- A curated list of awesome nanopore analysis tools.☆282Updated 2 weeks ago