Genome browser and variant annotation
☆392Oct 30, 2025Updated 5 months ago
Alternatives and similar repositories for gw
Users that are interested in gw are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Toolkit for calling structural variants using short or long reads☆115Mar 7, 2026Updated last month
- gia: Genomic Interval Arithmetic☆66Aug 21, 2024Updated last year
- Whole Genome Alignment Tools☆223Nov 6, 2025Updated 5 months ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆103Updated this week
- Wally: Visualization of aligned sequencing reads and contigs☆123Oct 9, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- expressions on VCFs☆91Mar 17, 2026Updated 3 weeks ago
- Per-base per-nucleotide depth analysis☆149Mar 16, 2026Updated 3 weeks ago
- Plot structural variant signals from many BAMs and CRAMs☆563Jul 13, 2024Updated last year
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆177Apr 1, 2026Updated last week
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆39Feb 15, 2025Updated last year
- Synteny and Rearrangement Identifier☆460Mar 17, 2026Updated 3 weeks ago
- Long read / genome alignment software☆312Dec 16, 2025Updated 3 months ago
- A list of interesting genome browser and genome visualization programs☆1,062Mar 26, 2026Updated 2 weeks ago
- BWT construction and search☆127Jan 14, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆141Feb 14, 2025Updated last year
- base-accurate DNA sequence alignments using WFA and mashmap3☆214Mar 20, 2026Updated 3 weeks ago
- Pairwise whole genome aligner☆234Mar 2, 2026Updated last month
- ☆126Apr 3, 2026Updated last week
- Structural variant toolkit for VCFs☆404Mar 21, 2026Updated 3 weeks ago
- A Rust library and command line tool for working with genomic ranges and their data.☆100May 29, 2024Updated last year
- ☆249Apr 1, 2026Updated last week
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆36Oct 27, 2025Updated 5 months ago
- Tool to plot synteny and structural rearrangements between genomes☆344Apr 7, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Align proteins to genomes with splicing and frameshift☆398Jan 5, 2026Updated 3 months ago
- Fast and accurate coordinate conversion between assemblies☆119Oct 9, 2025Updated 6 months ago
- bioinformatics toolkit in rust☆103Feb 15, 2026Updated last month
- Read-based phasing of genomic variants, also called haplotype assembly☆412Dec 31, 2025Updated 3 months ago
- Jasmine: SV Merging Across Samples☆246Dec 20, 2024Updated last year
- An accurate GFF3/GTF lift over pipeline☆532Aug 1, 2023Updated 2 years ago
- Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.☆406Apr 1, 2026Updated last week
- Constructing a pangenome gene graph☆205Aug 11, 2025Updated 8 months ago
- Creating alignment plots from bam files☆123Apr 1, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reorients assembled microbial sequences☆136Aug 21, 2025Updated 7 months ago
- Toolset for SV simulation, comparison and filtering☆415Dec 1, 2023Updated 2 years ago
- A genome completeness evaluation tool based on miniprot☆238Sep 18, 2025Updated 6 months ago
- ☆102Apr 22, 2024Updated last year
- Assembled Genomes Compressor☆179Mar 26, 2026Updated 2 weeks ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆129Updated this week
- fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing☆840Apr 1, 2026Updated last week