wjwei-handsome / wgatoolsLinks
Whole Genome Alignment Tools
☆212Updated last month
Alternatives and similar repositories for wgatools
Users that are interested in wgatools are comparing it to the libraries listed below
Sorting:
- An ultra-fast and efficient genomic tool for coverage calculation☆162Updated 8 months ago
- accurate LiftOver tool for new genome assemblies☆139Updated last year
- Constructing a pangenome gene graph☆200Updated 4 months ago
- Tools for plotting methylation data in various ways☆165Updated 3 weeks ago
- A bioinformatics tool for working with modified bases☆233Updated 2 weeks ago
- A tool for somatic structural variant calling using long reads☆157Updated last month
- ☆142Updated 3 weeks ago
- ☆108Updated 3 weeks ago
- Pangenome-based genome inference☆149Updated 2 weeks ago
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆200Updated 3 weeks ago
- Ultra-fast preprocessing and quality control for long-read sequencing data☆200Updated 3 months ago
- Pairwise whole genome aligner☆222Updated 2 weeks ago
- Dfam Transposable Element Tools Docker container.☆101Updated last month
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆143Updated 4 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated last week
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆169Updated 5 months ago
- A complete diploid human genome☆139Updated 2 months ago
- Collection of tools for the analysis of CpG data☆101Updated 5 months ago
- A list of software for pangenomics☆162Updated last week
- ☆226Updated 10 months ago
- ☆222Updated last week
- Jasmine: SV Merging Across Samples☆232Updated 11 months ago
- List of genome assembly tools☆87Updated 2 weeks ago
- GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered …☆214Updated this week
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆177Updated 2 years ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆110Updated 5 months ago
- This is the standalone version of the EviAnn pipeline☆130Updated last week
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆164Updated 2 years ago
- Version 5 of the CAFE phylogenetics software☆155Updated 10 months ago