wwood / galahLinks
More scalable dereplication for metagenome assembled genomes
☆74Updated this week
Alternatives and similar repositories for galah
Users that are interested in galah are comparing it to the libraries listed below
Sorting:
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆52Updated last year
- alignment-free coverage calculation for metagenomic binning >100 times faster☆48Updated 9 months ago
- Automatic eukaryotic taxonomic classification☆28Updated 7 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆70Updated 2 weeks ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆34Updated 2 years ago
- Unified Human Gut Virome Catalog☆38Updated last month
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆22Updated last year
- ☆63Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 4 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆35Updated this week
- Predict prokaryotic host for phage metagenomic sequences☆52Updated last year
- A tool for removing redundant genomes from a set of assemblies☆77Updated 3 months ago
- Strain resolver for metagenomics☆78Updated last year
- Classify metagenomic contigs as eukaryotic or prokaryotic☆42Updated 2 years ago
- ☆61Updated last year
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆95Updated 6 months ago
- Discover and annotate the virome☆54Updated last month
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 4 months ago
- Bacterial GWAS analysis☆46Updated last month
- A toolkit for prokaryotic comparative genomics☆51Updated last month
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆32Updated last week
- ☆33Updated last year
- A python library for predicting phage lifestyle based on genome sequence☆37Updated 2 years ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆81Updated this week
- Identify phage regions in bacterial genomes for masking purposes☆34Updated 6 years ago
- Comparisons of multiple different prophage predictions☆26Updated 3 years ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆39Updated 3 years ago
- ☆32Updated 2 months ago
- ☆33Updated 2 years ago