MAGScoT - a MAG scoring and refinement tool
☆44Apr 8, 2026Updated 3 weeks ago
Alternatives and similar repositories for MAGScoT
Users that are interested in MAGScoT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆75Mar 10, 2024Updated 2 years ago
- SemiBin: metagenomics binning with self-supervised deep learning☆161Apr 25, 2026Updated last week
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆25Mar 19, 2023Updated 3 years ago
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated last year
- An algorithm for clustering metagenomic sequences.☆41Dec 12, 2025Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆33Jul 16, 2023Updated 2 years ago
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆75Mar 3, 2026Updated 2 months ago
- ☆15Oct 14, 2023Updated 2 years ago
- ☆20Apr 24, 2025Updated last year
- Assessing the quality of metagenome-derived genome bins using machine learning☆257Mar 20, 2025Updated last year
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆101Apr 27, 2026Updated last week
- ☆25Jun 20, 2023Updated 2 years ago
- Predict prokaryotic host for phage metagenomic sequences☆56Sep 17, 2024Updated last year
- Deepurify is a tool to filter the contaminated contigs in a MAG with a language model.☆23Jun 3, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆23May 14, 2023Updated 2 years ago
- HyGen: Compact and Efficient Genome Sketching using Hyperdimensional Vectors☆30Aug 26, 2024Updated last year
- Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets☆25Updated this week
- ☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs☆37Oct 24, 2025Updated 6 months ago
- Tool for unsupervised contig binning from viral metagenomes☆18Oct 22, 2021Updated 4 years ago
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆89Aug 13, 2024Updated last year
- More scalable dereplication for metagenome assembled genomes☆80Mar 8, 2026Updated last month
- Improving genome bins through the combination of different binning programs☆31Jan 30, 2023Updated 3 years ago
- Python package for detection of chimerism and contamination in prokaryotic genomes.☆90Mar 12, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Metagenomic Binning Algorithm☆51Jan 16, 2026Updated 3 months ago
- ☆64Feb 27, 2024Updated 2 years ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆50Mar 13, 2025Updated last year
- Virus Protein Family tools☆31Jul 20, 2022Updated 3 years ago
- Assessing and Improving the quality of metagenomic assemblies☆31Feb 21, 2022Updated 4 years ago
- Scalable creating/updating of metagenome profiling databases☆62Jun 25, 2025Updated 10 months ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆249Oct 12, 2025Updated 6 months ago
- Tool to estimate genome quality of microbial eukaryotes☆41Aug 1, 2025Updated 9 months ago
- Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequenc…☆128Apr 19, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Grabbing genome accessions & download info based on taxonomy, using the NCBI REST API, w00t☆12Feb 23, 2025Updated last year
- Precise host read removal☆122Apr 13, 2026Updated 3 weeks ago
- This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)☆37Apr 7, 2026Updated 3 weeks ago
- A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.☆49Feb 5, 2026Updated 2 months ago
- Read alignment statistics for metagenomics☆396Apr 8, 2026Updated 3 weeks ago
- Identify and remove contaminants from metagenome-assembled genomes☆18Feb 16, 2024Updated 2 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated last year