Phage-Host Interaction Search Tool
☆33Sep 10, 2026Updated last week
Alternatives and similar repositories for PHIST
Users that are interested in PHIST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict prokaryotic host for phage metagenomic sequences☆57Sep 17, 2024Updated 2 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆55Jul 3, 2024Updated 2 years ago
- Phage prediction tools☆15Aug 1, 2023Updated 3 years ago
- Host prediction for phages☆29Nov 6, 2024Updated last year
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆41Apr 20, 2026Updated 4 months ago
- viral Host UnveiLing Kit (vHULK)☆15May 15, 2025Updated last year
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆61Jun 4, 2025Updated last year
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- Binning Virus Genomes from Metagenomes☆76Jul 13, 2022Updated 4 years ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆278Mar 20, 2025Updated last year
- Embedding-based indexing for compact storage and rapid querying of bacterial pan-genomes☆24Jul 11, 2026Updated 2 months ago
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- ☆33Jul 16, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.☆21Mar 8, 2026Updated 6 months ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆234Mar 24, 2026Updated 5 months ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆189Mar 17, 2026Updated 6 months ago
- ☆13Feb 29, 2024Updated 2 years ago
- ☆35Oct 6, 2025Updated 11 months ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆77Aug 13, 2026Updated last month
- Assessing and Improving the quality of metagenomic assemblies☆31Feb 21, 2022Updated 4 years ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆39Dec 20, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Virus Identification By iteRative ANnoTation☆204Apr 15, 2024Updated 2 years ago
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- A tool for distinguish temperate phage-derived and virulent phage-derived sequence in metavirome data using deep learning☆28Nov 20, 2023Updated 2 years ago
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆86Sep 7, 2026Updated last week
- customizable pipeline to identify viral sequences from (meta)genomic data☆299Nov 28, 2024Updated last year
- Comparisons of multiple different prophage predictions☆26Feb 12, 2026Updated 7 months ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆23Aug 14, 2025Updated last year
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆342Updated this week
- Code and database related to our manuscript "Predicting bacteriophage hosts based on receptor-binding proteins"☆13Nov 2, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Oct 14, 2023Updated 2 years ago
- Phage Annotation using Protein Structures☆175Updated this week
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆25Mar 19, 2023Updated 3 years ago
- Unified Human Gut Virome Catalog☆48May 29, 2026Updated 3 months ago
- MAGScoT - a MAG scoring and refinement tool☆49Apr 8, 2026Updated 5 months ago
- StrainEst - abundance estimation of strains☆20Jan 17, 2020Updated 6 years ago
- Viral protein family functional prediction using protein language models☆23Jan 6, 2026Updated 8 months ago