CAMI-challenge / AMBERLinks
AMBER: Assessment of Metagenome BinnERs
☆31Updated 6 months ago
Alternatives and similar repositories for AMBER
Users that are interested in AMBER are comparing it to the libraries listed below
Sorting:
- Strain Resolution ON Graphs☆48Updated 2 years ago
- Assessing and Improving the quality of metagenomic assemblies☆29Updated 3 years ago
- Scalable creating/updating of metagenome profiling databases☆61Updated 3 weeks ago
- Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.☆24Updated 9 months ago
- Microbiome classification pipeline☆66Updated 2 months ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆39Updated 3 weeks ago
- A package to annotate protein sequences☆59Updated 4 months ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆31Updated 4 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆38Updated 10 months ago
- Graph-based assembly phasing☆85Updated 2 months ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆32Updated 11 months ago
- Automatic eukaryotic taxonomic classification☆29Updated 2 months ago
- Discover and annotate the virome☆44Updated 2 weeks ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Updated 5 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆40Updated 5 years ago
- 🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs☆63Updated 9 months ago
- Gene-flank analysis tool☆28Updated 7 months ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆61Updated 10 months ago
- A toolkit for prokaryotic comparative genomics☆49Updated 5 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated last month
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆42Updated 4 years ago
- ☆45Updated 2 years ago
- ☆16Updated last year
- An R package designed for drawing gene arrow maps☆83Updated last week
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆37Updated 6 months ago
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 2 years ago
- MAG Circularization Method☆33Updated 3 years ago
- ☆29Updated last year