The binning tool with dynamic contrastive learning and deep language model
☆25Aug 14, 2026Updated 3 weeks ago
Alternatives and similar repositories for CompleteBin
Users that are interested in CompleteBin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Jan 6, 2026Updated 7 months ago
- Repository for codes, analyses and visualizations for the CAMI II challenges☆15Sep 4, 2023Updated 3 years ago
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆23Aug 20, 2026Updated 2 weeks ago
- Deepurify is a tool to filter the contaminated contigs in a MAG with a language model.☆24Jun 3, 2025Updated last year
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆79Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- More scalable dereplication for metagenome assembled genomes☆87Updated this week
- ☆23Sep 19, 2025Updated 11 months ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆29Jan 15, 2026Updated 7 months ago
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Aug 28, 2026Updated last week
- ☆83Aug 23, 2026Updated last week
- ☆12Jun 3, 2025Updated last year
- This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)☆40Jul 27, 2026Updated last month
- SemiBin: metagenomics binning with self-supervised deep learning☆174Aug 3, 2026Updated last month
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 3 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆27Jun 20, 2023Updated 3 years ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated 10 months ago
- tiara – a tool for DNA sequence classification☆88Mar 2, 2024Updated 2 years ago
- ☆15Oct 14, 2023Updated 2 years ago
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆25Mar 19, 2023Updated 3 years ago
- Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequenc…☆221Jul 22, 2026Updated last month
- ☆116Updated this week
- ☆14Sep 2, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for (pan)genome-resolved metagenomics and metatranscript…☆27Aug 4, 2026Updated last month
- MetagenOmic read Re-Assigner and abundance quantifier☆21Jun 24, 2026Updated 2 months ago
- A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.☆55Jul 10, 2026Updated last month
- PlasMAAG is a tool to recover plasmids and organisms from metagenomic samples☆32Updated this week
- MAGScoT - a MAG scoring and refinement tool☆49Apr 8, 2026Updated 4 months ago
- ☆13Jul 23, 2026Updated last month
- A hybrid assembly and MAG recovery pipeline (and more!)☆118Updated this week
- gemsparcl 💎✨ Rapid and consistent clustering of millions of genomes highlights the diversity of prokaryotic life☆17Jun 16, 2026Updated 2 months ago
- ☆65Feb 27, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A metagenome assembler for the linked-reads with high-barcode specificity☆10Feb 27, 2026Updated 6 months ago
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆23Nov 25, 2025Updated 9 months ago
- MAGinator - Accurate SNV calling and profiling of MAGs☆28Mar 23, 2026Updated 5 months ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆24May 14, 2023Updated 3 years ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆276Mar 20, 2025Updated last year
- sunburst plots for taxonomy - working to update Krona☆46Sep 22, 2025Updated 11 months ago
- ☆20Jan 12, 2017Updated 9 years ago