tsailabSJ / circleseqLinks
☆22Updated 6 years ago
Alternatives and similar repositories for circleseq
Users that are interested in circleseq are comparing it to the libraries listed below
Sorting:
- Analysis pipeline for the GUIDE-seq assay.☆78Updated 2 years ago
- ☆58Updated 3 years ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated last month
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 4 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- New version of JACUSA -> 2.0☆27Updated 2 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆38Updated 5 months ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 6 months ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆68Updated 2 years ago
- A comprehensive, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data☆17Updated 4 years ago
- ☆49Updated 3 years ago
- A set of pipelines for Hi-C and ChIP-Seq analysis.☆46Updated last year
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- HiCorr: a Hi-C data bias-correction pipeline☆28Updated 3 months ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- Fork of the Polysolver project☆31Updated 5 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- A 3D genome data processing tutorial for ISMB/ECCB 2017☆50Updated 7 years ago
- Tools for making plots of genomic datasets in a genome-browser-like format☆32Updated 7 months ago
- Circular RNA Identification for Nanopore Sequencing☆21Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆77Updated 3 years ago
- HiC uniform processing pipeline☆60Updated last year
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 3 months ago
- Quantification of transposable element expression using RNA-seq☆71Updated last year
- An easy-to-use Hi-C data processing software supporting distributed computation.☆61Updated 11 months ago
- ☆44Updated 2 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆64Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆65Updated 6 years ago
- Tools for analyzing DNA methylation data☆42Updated last week