Nealelab / UKBB_ldscLinks
Sample code for ldsc analyses in UKBB
☆31Updated 2 years ago
Alternatives and similar repositories for UKBB_ldsc
Users that are interested in UKBB_ldsc are comparing it to the libraries listed below
Sorting:
- Scripts used for generating Neale Lab UKB results☆20Updated 2 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Use gene expression to predict phenotype sample information☆19Updated 7 years ago
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated last year
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- ☆18Updated 7 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 5 months ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- GWAS gold standards repository☆37Updated last year
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated last year
- An interactive graphical illustration of genetic associations and their biological context☆17Updated last year
- DEPICT code, instructions and an example☆50Updated 3 years ago
- Functional genomics and genome-wide association studies☆67Updated 7 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Genetics ToolboX R package☆32Updated 5 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆29Updated 4 months ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 3 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago