☆11Jul 3, 2022Updated 4 years ago
Alternatives and similar repositories for exodus
Users that are interested in exodus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a comparative genome browser for bacteriophages☆21Updated this week
- PgRC: Pseudogenome based Read Compressor☆14Nov 20, 2024Updated last year
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆42Apr 20, 2026Updated 6 months ago
- ☆13Feb 29, 2024Updated 2 years ago
- viralFlye pipeline☆19Aug 12, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python package for phage-host interaction prediction☆30Aug 31, 2026Updated 2 months ago
- ☆10Oct 30, 2018Updated 8 years ago
- ☆20Nov 17, 2022Updated 3 years ago
- Locate antiviral defence systems in prokaryotic genomes☆78Oct 22, 2024Updated 2 years ago
- Ley Lab MetaGenome Profiler DataBase generator☆48Nov 9, 2022Updated 3 years ago
- snapper☆13Jul 8, 2024Updated 2 years ago
- Metagenomics microbial abundance quantification☆28Sep 22, 2022Updated 4 years ago
- A mathematically characterized hypothesis test for organism presence/absence in a metagenome☆38Updated this week
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Official Repository for ZipStrain python package☆14Updated this week
- A Pyrodigal extension to predict genes in RNA viruses.☆12May 3, 2026Updated 5 months ago
- A tool for identifying active prophage elements through read mapping☆14Oct 9, 2023Updated 3 years ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆39Dec 20, 2024Updated last year
- ☆33Jul 14, 2021Updated 5 years ago
- Pathway-Guided Pruning Reconstruction of Genome-Scale Metabolic Models☆13Nov 28, 2023Updated 2 years ago
- convert bash/r/python history or unstructured code in snakefiles☆12Jul 15, 2026Updated 3 months ago
- Phage Annotation Workshop 2021☆14Dec 6, 2021Updated 4 years ago
- ☆14Jul 30, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆37Dec 6, 2023Updated 2 years ago
- ☆13Sep 17, 2026Updated last month
- a versatile toolkit for processing and analyzing diverse types of sequence data☆24May 19, 2026Updated 5 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆39Oct 14, 2026Updated 2 weeks ago
- ☆10Jul 23, 2020Updated 6 years ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 11 months ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆58Jul 9, 2026Updated 3 months ago
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 6 years ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆22Sep 16, 2026Updated last month
- Nextflow wrapper built around nf-core/modules☆12Nov 25, 2024Updated last year
- Vanjari is a tool for the classification of viruses using neural networks☆14Nov 21, 2025Updated 11 months ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆52Aug 17, 2022Updated 4 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Jun 22, 2021Updated 5 years ago
- StrainEst - abundance estimation of strains☆19Jan 17, 2020Updated 6 years ago
- Jaeger is a quick and precise tool for detecting viruses in sequence assemblies.☆10Oct 14, 2026Updated 2 weeks ago