ilyavs / exodusLinks
☆11Updated 2 years ago
Alternatives and similar repositories for exodus
Users that are interested in exodus are comparing it to the libraries listed below
Sorting:
- Hierarchical clustering of cgMLST☆11Updated last year
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆11Updated last year
- Hybrid Assembler for Plasmids☆10Updated 2 years ago
- Computation of average nucleotide identity with the use of MMseqs2☆13Updated 6 months ago
- Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C…☆10Updated 4 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆20Updated 6 months ago
- A Hierarchical Approach to Pangenomics Inference☆11Updated last year
- Prophage Activity Estimator☆26Updated last year
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- A Swiss-Army-Knife for Bioinformaticians☆12Updated this week
- viralFlye pipeline☆18Updated 10 months ago
- Population genomics from metagenomes☆11Updated 9 months ago
- ☆26Updated 2 years ago
- ☆9Updated 2 years ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆45Updated last month
- Hydrocarbon biodegradation gene annotation☆15Updated 2 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆23Updated last week
- ☆16Updated 2 years ago
- A random forest classifier to identify contigs of plasmid origin in contig and scaffold genomes☆19Updated 2 years ago
- HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps☆14Updated 2 years ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Updated last year
- ZGA prokaryotic genome assembly and annotation pipeline☆12Updated 9 months ago
- An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences☆25Updated 2 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated 10 months ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆35Updated 3 years ago
- ☆23Updated 4 months ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆19Updated last year
- Reproducible scripts and notebooks for 2019 paper on population genetics in metagenomes☆16Updated 5 years ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆30Updated 2 years ago