Decombinator v5: fast, error-correcting analysis of TCR repertoires
☆27Feb 24, 2026Updated last week
Alternatives and similar repositories for decombinator
Users that are interested in decombinator are comparing it to the libraries listed below
Sorting:
- Python library for immune repertoire analysis☆17Jan 26, 2026Updated last month
- A RepSeq processing swiss-knife☆41Mar 29, 2024Updated last year
- Mapping the Functional Landscape of TCR Repertoire☆36Oct 8, 2021Updated 4 years ago
- Detecting TCR involved in immune responses from single RepSeq datasets☆27Jun 17, 2019Updated 6 years ago
- A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.☆23Sep 10, 2023Updated 2 years ago
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 8 years ago
- ☆12Jun 29, 2018Updated 7 years ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 3 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- ☆14Oct 9, 2025Updated 4 months ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 2 years ago
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 3 months ago
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated last year
- ☆10Mar 24, 2025Updated 11 months ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- ☆12Dec 7, 2020Updated 5 years ago
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Apr 28, 2021Updated 4 years ago
- An R package for estimating library complexity☆13Sep 4, 2022Updated 3 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- ☆11Nov 21, 2025Updated 3 months ago
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- Bead-based single-cell atac processing☆33Nov 13, 2021Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Apr 4, 2025Updated 10 months ago
- Quality control for phylogenetic analyses☆13Feb 23, 2026Updated last week
- ☆14May 26, 2020Updated 5 years ago
- Higher level repo for aggregating all of Atlas workflow logic for Single Cell☆14Updated this week
- Mosaic single cell data integration using non-overlapping features☆38Sep 20, 2022Updated 3 years ago
- ☆19Apr 14, 2024Updated last year
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Feb 1, 2023Updated 3 years ago
- i-ADHoRe is a highly sensitive software tool to detect degenerated homology relations within and between different genomes.☆17Jun 28, 2024Updated last year
- Variant quality checking scripts.☆11Feb 4, 2016Updated 10 years ago
- Variant call verification☆16May 12, 2025Updated 9 months ago
- phylogenetic analyses informed by deep mutational scanning data☆15Jun 12, 2024Updated last year
- ☆21Mar 20, 2017Updated 8 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Nov 5, 2020Updated 5 years ago