Module for reading ABI Sanger sequencing trace files
☆38Jun 15, 2016Updated 10 years ago
Alternatives and similar repositories for abifpy
Users that are interested in abifpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Repository of standardized biological experimental data and metadata☆15Jan 9, 2025Updated last year
- 🎨 Python library to plot multi-part genetic constructs☆26Apr 9, 2025Updated last year
- Sequencing analysis pipeline☆15Dec 12, 2025Updated 6 months ago
- 🧬 Chromatogram File Utils, a package that integrates trace visualization, mutation calling and quality control for Sanger sequencing dat…☆23May 22, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11Mar 10, 2024Updated 2 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Dec 17, 2021Updated 4 years ago
- ☆15Aug 22, 2023Updated 2 years ago
- ☆16Dec 19, 2016Updated 9 years ago
- ☆16Jan 10, 2022Updated 4 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Oct 26, 2021Updated 4 years ago
- The Functional Analysis through Hidden Markov Models Software and Server☆14Nov 6, 2014Updated 11 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆32Apr 9, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Remove primer sequence from BAM alignments by soft-clipping☆30Dec 5, 2019Updated 6 years ago
- ☆24Aug 20, 2018Updated 7 years ago
- ABIF parser, writer and generator☆11Dec 8, 2023Updated 2 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆26Feb 13, 2025Updated last year
- (No maintenance) Detect gene fusion directly from raw fastq files☆25Aug 13, 2017Updated 8 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- gap opening realigner for BAM data streams☆18Oct 17, 2012Updated 13 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 2 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆32Dec 26, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TRAPPIST: Totally Rad Analysis Pipelines Python Informatics Super Tool (actually, a python-based genomics analysis toolbox)☆14Jan 25, 2018Updated 8 years ago
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆34Aug 18, 2025Updated 10 months ago
- An amino acid sequence annotator☆17May 15, 2025Updated last year
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Nov 21, 2020Updated 5 years ago
- A deliberately simple Django app for managing IT inventory☆13Jul 14, 2016Updated 9 years ago
- A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data☆10Oct 1, 2024Updated last year
- Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.☆18May 14, 2018Updated 8 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆23Aug 7, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ultra-fast, high-performing structural variation (SV) detector☆24Apr 26, 2023Updated 3 years ago
- ☆13May 2, 2018Updated 8 years ago
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- C++ wrapper to tabix indexer☆17Jun 27, 2025Updated last year
- de novo virus assembler of Illumina paired reads☆58May 17, 2021Updated 5 years ago
- A Lossy compressor for Quality Scores in Genomic Data☆12Oct 4, 2016Updated 9 years ago
- Multiplex Primer Design☆21Oct 30, 2020Updated 5 years ago