scottzijiezhang / RADARLinks
The project for analyzing differential methylation of MeRIP-seq data
☆22Updated 2 years ago
Alternatives and similar repositories for RADAR
Users that are interested in RADAR are comparing it to the libraries listed below
Sorting:
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆35Updated 3 years ago
- binned motif enrichment analysis and visualisation☆43Updated last month
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 5 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Peak calling for 4C data☆13Updated 7 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Extract Sequence from Genome According to Annotation File☆38Updated 8 months ago
- Motif manipulation functions for R.☆30Updated 2 months ago
- Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)☆20Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ☆41Updated 3 years ago
- ☆15Updated 3 years ago
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- Snakemake pipeline for running MAJIQ☆23Updated 2 years ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆11Updated 8 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 8 months ago
- SCASA: Single cell transcript quantification tool☆22Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated last year
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- documentation for trackViewer☆29Updated 6 years ago
- An R interface to the MEME Suite☆53Updated 6 months ago