Alternatives and similar repositories for RADAR

Users that are interested in RADAR are comparing it to the libraries listed below

• stjude / ChIPseqSpikeInFree
  A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications
  ☆33Updated 3 years ago
• fmicompbio / monaLisa
  binned motif enrichment analysis and visualisation
  ☆41Updated last month
• maxsonBraunLab / gopeaks
  Peak caller for CUT&TAG data
  ☆29Updated 3 years ago
• YosefLab / ImpulseDE2
  ☆41Updated 3 years ago
• eudoraleer / scasa
  SCASA: Single cell transcript quantification tool
  ☆22Updated last year
• shunliubio / easym6A
  Process m6A/MeRIP-seq data in a single or batch job mode
  ☆20Updated 5 years ago
• dan-landau / IronThrone-GoT
  processes GoT amplicon data and generates a table of metrics
  ☆32Updated 3 years ago
• mbassalbioinformatics / ChIP-AP
  An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis
  ☆22Updated last year
• VCCRI / Sierra
  Discover differential transcript usage from polyA-captured single cell RNA-seq data
  ☆51Updated 2 years ago
• MengjunWu / TCseq
  An R package for time course sequencing data analysis
  ☆20Updated 2 years ago
• TranslationalBioinformaticsUnit / GeneSetCluster
  a tool for summarizing and integrating gene-set analysis results
  ☆16Updated last year
• junjunlab / tackPlotR
  An R package to visualize bigwigs.
  ☆31Updated 3 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆45Updated 5 years ago
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆38Updated 6 months ago
• YangLab / CLEAR
  direct comparison of circular and linear RNA expression
  ☆22Updated 4 years ago
• markowetzlab / Drews2022_CIN_Compendium
  Main repository for Drews et al. (Nature, 2022)
  ☆42Updated 2 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆61Updated 4 years ago
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆25Updated last year
• sjczheng / EpiDISH
  This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…
  ☆54Updated 2 months ago
• aertslab / PUMATAC
  Pipeline for Universal Mapping of ATAC-seq
  ☆25Updated 3 weeks ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆65Updated last year
• snystrom / memes
  An R interface to the MEME Suite
  ☆52Updated 4 months ago
• kundajelab / ataqc
  ☆17Updated 6 years ago
• shizhuoxing / scISA-Tools
  single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…
  ☆25Updated last year
• GreenleafLab / chromVARmotifs
  R package with motifs for use with chromVAR
  ☆28Updated 7 years ago
• gxiaolab / REDITs
  RNA editing tests
  ☆17Updated 5 years ago
• Aufiero / circRNAprofiler
  ☆11Updated 5 months ago
• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 4 years ago
• zhejilab / RibORF
  Identifying genome-wide translated open reading frames using ribosome profiling
  ☆23Updated 2 years ago