tobiasrausch / wallyLinks
Wally: Visualization of aligned sequencing reads and contigs
☆120Updated 2 months ago
Alternatives and similar repositories for wally
Users that are interested in wally are comparing it to the libraries listed below
Sorting:
- Toolkit for calling structural variants using short or long reads☆115Updated 2 weeks ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated 2 weeks ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆116Updated last month
- Simple pileup-based variant caller☆95Updated 8 months ago
- Fast and accurate coordinate conversion between assemblies☆117Updated 2 months ago
- ☆121Updated last month
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- Phased assembly variant caller☆130Updated last year
- Pipeline to convert a haploid assembly into diploid☆108Updated 11 months ago
- ☆52Updated 3 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- Collection of tools for the analysis of CpG data☆102Updated 5 months ago
- A list of software for pangenomics☆164Updated 2 weeks ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆105Updated 4 years ago
- Research release basecalling models and configurations☆117Updated 7 months ago
- Pangenome-based genome inference☆152Updated 3 weeks ago
- Structural variant caller for real-time long-read sequencing data☆61Updated 3 years ago
- Copy number caller for long read data including SNV utilization☆68Updated 8 months ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆106Updated 3 months ago
- ☆144Updated last month
- A local-haplotagging-based small and structural variant caller☆90Updated last week
- SV caller for nanopore data☆92Updated 5 years ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- A complete diploid human genome☆140Updated 3 months ago
- Dfam Transposable Element Tools Docker container.☆101Updated last week
- ☆81Updated 5 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆105Updated last week
- Yet another k-mer analyzer☆152Updated this week
- ☆101Updated last year
- Error correction of ONT transcript reads☆58Updated 2 years ago