tobiasrausch / wally
Wally: Visualization of aligned sequencing reads and contigs
☆115Updated 2 weeks ago
Alternatives and similar repositories for wally:
Users that are interested in wally are comparing it to the libraries listed below
- Simple pileup-based variant caller☆89Updated last week
- Somatic structural variant caller for long-read data☆65Updated last week
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last week
- Same species annotation lift over pipeline.☆97Updated last year
- Toolkit for calling structural variants using short or long reads☆103Updated last week
- Pangenome-based genome inference☆128Updated 2 weeks ago
- ☆46Updated 8 months ago
- Phased assembly variant caller☆112Updated 5 months ago
- Fast and accurate coordinate conversion between assemblies☆112Updated last month
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆72Updated 4 years ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆102Updated last month
- ☆39Updated 2 weeks ago
- Dfam Transposable Element Tools Docker container.☆92Updated last month
- SV caller for nanopore data☆91Updated 4 years ago
- Pipeline to convert a haploid assembly into diploid☆100Updated 3 months ago
- A tool for somatic structural variant calling using long reads☆128Updated this week
- A list of software for pangenomics☆111Updated last week
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- ☆78Updated 4 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆81Updated 2 years ago
- BAM Statistics, Feature Counting and Annotation☆149Updated 2 months ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆103Updated 3 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆110Updated 2 weeks ago
- Error correction of ONT transcript reads☆58Updated last year
- Collection of tools for the analysis of CpG data☆81Updated 3 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆96Updated last month
- Snakemake pipelines for nanopore sequencing data archiving and processing☆90Updated 3 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆105Updated 4 years ago
- Synteny Imager☆61Updated 8 months ago