Jasmine: SV Merging Across Samples
☆259Dec 20, 2024Updated last year
Alternatives and similar repositories for Jasmine
Users that are interested in Jasmine are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Structural variant toolkit for VCFs☆422May 22, 2026Updated 3 months ago
- Toolset for SV simulation, comparison and filtering☆425Dec 1, 2023Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆117Aug 21, 2026Updated last week
- Application of pan-genome for population☆121Oct 26, 2025Updated 10 months ago
- Graph realignment tools for structural variants☆171Dec 8, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotation and Ranking of Structural Variation☆310Aug 11, 2026Updated 2 weeks ago
- Pangenome-based genome inference☆179Aug 18, 2026Updated last week
- Long read based human genomic structural variation detection with cuteSV☆292Aug 21, 2026Updated last week
- Plot structural variant signals from many BAMs and CRAMs☆572Jul 13, 2024Updated 2 years ago
- Structural variation caller using third generation sequencing☆677Jul 20, 2026Updated last month
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 3 years ago
- Structural variant (SV) analysis tools☆41Jul 1, 2024Updated 2 years ago
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 5 years ago
- Structural Variant Identification Method using Genome Assemblies☆147Sep 16, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Structural variant merging tool☆57Aug 23, 2024Updated 2 years ago
- ☆130Aug 24, 2026Updated last week
- A tool for somatic structural variant calling using long reads☆178Jun 8, 2026Updated 2 months ago
- Long read / genome alignment software☆330Dec 16, 2025Updated 8 months ago
- Structural Variant Identification Method using Long Reads☆185Jun 29, 2021Updated 5 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆168Jul 15, 2026Updated last month
- Tools for the analysis of structural variation in genomes☆81Feb 23, 2026Updated 6 months ago
- Evaluating genome assemblies☆125Mar 3, 2026Updated 5 months ago
- structural variant calling and genotyping with existing tools, but, smoothly.☆267Jun 17, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆119Jun 6, 2021Updated 5 years ago
- Synteny and Rearrangement Identifier☆485Jul 1, 2026Updated last month
- Phased assembly variant caller☆142Dec 4, 2024Updated last year
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated last year
- Structural variant caller☆54Dec 8, 2021Updated 4 years ago
- Structural variation and indel detection by local assembly☆258Aug 19, 2026Updated last week
- Fast and accurate coordinate conversion between assemblies☆119Jun 1, 2026Updated 3 months ago
- Population-scale genotyping using pangenome graphs☆201Jan 9, 2025Updated last year
- use variant nesting information to flter overlapping sites from vg deconstruct output☆37Jun 12, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆413Updated this week
- Evaluation and polishing workflows for T2T genome assemblies☆167Jun 26, 2026Updated 2 months ago
- the pangenome graph builder☆513Jul 24, 2026Updated last month
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆31Sep 19, 2022Updated 3 years ago
- GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered …☆271Updated this week
- Tandem repeat expansion detection or genotyping from long-read alignments☆170Mar 25, 2026Updated 5 months ago
- ☆102Apr 22, 2024Updated 2 years ago