KolmogorovLab / SeverusLinks
A tool for somatic structural variant calling using long reads
☆150Updated 3 weeks ago
Alternatives and similar repositories for Severus
Users that are interested in Severus are comparing it to the libraries listed below
Sorting:
- Tandem repeat genotyping and visualization from PacBio HiFi data☆127Updated last week
- Jasmine: SV Merging Across Samples☆230Updated 10 months ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆160Updated 8 months ago
- Tools for plotting methylation data in various ways☆163Updated 2 weeks ago
- Tandem repeat expansion detection or genotyping from long-read alignments☆130Updated 2 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated last month
- Pangenome-based genome inference☆149Updated 3 months ago
- Research release basecalling models and configurations☆115Updated 5 months ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆163Updated last week
- Collection of tools for the analysis of CpG data☆97Updated 4 months ago
- A complete diploid human genome☆137Updated last month
- SV detection tool for nanopore sequence reads☆95Updated 7 months ago
- accurate LiftOver tool for new genome assemblies☆137Updated last year
- ☆119Updated 2 weeks ago
- ☆139Updated 2 weeks ago
- Phased assembly variant caller☆129Updated 11 months ago
- Yet another k-mer analyzer☆151Updated last month
- Somatic structural variant caller for long-read data☆83Updated this week
- Structural Variant Identification Method using Long Reads☆178Updated 4 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆114Updated last year
- Constructing a pangenome gene graph☆198Updated 3 months ago
- ☆105Updated last month
- Graph realignment tools for structural variants☆164Updated 2 years ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 4 years ago
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆162Updated 2 years ago
- Variant calling tool for long-read sequencing data☆113Updated 7 months ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆117Updated 4 months ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆175Updated last year
- ☆50Updated last month