Alternatives and similar repositories for Severus

Users that are interested in Severus are comparing it to the libraries listed below

• PacificBiosciences / trgt
  Tandem repeat genotyping and visualization from PacBio HiFi data
  ☆122Updated last week
• mkirsche / Jasmine
  Jasmine: SV Merging Across Samples
  ☆219Updated 7 months ago
• PacificBiosciences / pbsv
  pbsv - PacBio structural variant (SV) calling and analysis tools
  ☆155Updated 5 months ago
• nanoporetech / rerio
  Research release basecalling models and configurations
  ☆115Updated 2 months ago
• adamewing / methylartist
  Tools for plotting methylation data in various ways
  ☆159Updated last week
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆135Updated last week
• tobiasrausch / wally
  Wally: Visualization of aligned sequencing reads and contigs
  ☆118Updated 3 months ago
• wdecoster / cramino
  A *fast* tool for BAM/CRAM quality evaluation, intended for long reads
  ☆155Updated last month
• marbl / HG002
  A complete diploid human genome
  ☆123Updated last week
• nanoporetech / pychopper
  A tool to identify, orient, trim and rescue full length cDNA reads
  ☆82Updated 3 years ago
• EichlerLab / pav
  Phased assembly variant caller
  ☆123Updated 8 months ago
• bcgsc / straglr
  Tandem repeat expansion detection or genotyping from long-read alignments
  ☆120Updated this week
• informationsea / transanno
  accurate LiftOver tool for new genome assemblies
  ☆132Updated last year
• epi2me-labs / wf-transcriptomes
  ☆99Updated last week
• milkschen / leviosam2
  Fast and accurate coordinate conversion between assemblies
  ☆113Updated 4 months ago
• WGLab / NanoCaller
  Variant calling tool for long-read sequencing data
  ☆112Updated 4 months ago
• epi2me-labs / wf-human-variation
  ☆131Updated last week
• lh3 / yak
  Yet another k-mer analyzer
  ☆144Updated last year
• cortes-ciriano-lab / savana
  Somatic structural variant caller for long-read data
  ☆78Updated last month
• PacificBiosciences / pb-CpG-tools
  Collection of tools for the analysis of CpG data
  ☆87Updated 3 weeks ago
• eldariont / svim
  Structural Variant Identification Method using Long Reads
  ☆173Updated 4 years ago
• twolinin / longphase
  ☆116Updated 3 months ago
• epi2me-labs / modbam2bed
  ☆49Updated 11 months ago
• arangrhie / T2T-Polish
  Evaluation and polishing workflows for T2T genome assemblies
  ☆136Updated last month
• lh3 / pangene
  Constructing a pangenome gene graph
  ☆193Updated 2 months ago
• Dfam-consortium / TETools
  Dfam Transposable Element Tools Docker container.
  ☆99Updated last month
• GenomeRIK / tama
  Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)
  ☆155Updated 2 years ago
• parklab / xTea
  Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
  ☆115Updated last month
• epi2me-labs / pychopper
  cDNA read preprocessing
  ☆77Updated last year
• friend1ws / nanomonsv
  SV detection tool for nanopore sequence reads
  ☆93Updated 4 months ago