marbl / KronaLinks
Interactively explore metagenomes and more from a web browser.
☆490Updated 4 years ago
Alternatives and similar repositories for Krona
Users that are interested in Krona are comparing it to the libraries listed below
Sorting:
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆664Updated 3 years ago
- Genome assembly evaluation tool☆488Updated last year
- 🌈 Interactive analysis of metagenomics data☆440Updated 4 months ago
- hybrid assembly pipeline for bacterial genomes☆632Updated last year
- Rapid haploid variant calling and core genome alignment☆561Updated last month
- ☆347Updated 10 months ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆401Updated 7 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆469Updated last month
- A complete pipeline for metagenomic analysis☆441Updated last week
- Fast Whole-Genome Similarity (ANI) Estimation☆447Updated last month
- The second version of the Kraken taxonomic sequence classification system☆863Updated 3 weeks ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆893Updated 8 months ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆275Updated 2 weeks ago
- Pilon is an automated genome assembly improvement and variant detection tool☆374Updated 3 years ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆402Updated 2 weeks ago
- adapter trimmer for Oxford Nanopore reads☆381Updated last year
- Plotting scripts for long read sequencing data☆526Updated last month
- A flexible pipeline for complete analysis of bacterial genomes☆496Updated last month
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆365Updated 5 months ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆550Updated last year
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆454Updated 2 years ago
- TransDecoder source☆301Updated 4 months ago
- A single molecule sequence assembler for genomes large and small.☆695Updated 2 months ago
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆298Updated 9 months ago
- Rapid large-scale prokaryote pan genome analysis☆367Updated 2 months ago
- Eukaryotic Genome Annotation Pipeline☆378Updated last week
- Mummer alignment tool☆547Updated 11 months ago
- NCBI Prokaryotic Genome Annotation Pipeline☆364Updated 2 months ago
- Sequence correction provided by ONT Research☆495Updated last month
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆554Updated 2 weeks ago