marbl / Krona
Interactively explore metagenomes and more from a web browser.
☆471Updated 3 years ago
Alternatives and similar repositories for Krona:
Users that are interested in Krona are comparing it to the libraries listed below
- Fast genome-wide functional annotation through orthology assignment☆610Updated 11 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆499Updated last month
- 🌈 Interactive analysis of metagenomics data☆415Updated 7 months ago
- ☆241Updated 10 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆419Updated last year
- The second version of the Kraken taxonomic sequence classification system☆779Updated this week
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆307Updated 2 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆402Updated last year
- Rapid large-scale prokaryote pan genome analysis☆342Updated 3 years ago
- NCBI Prokaryotic Genome Annotation Pipeline☆334Updated this week
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆335Updated last year
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆370Updated 7 months ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆271Updated last week
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆612Updated 2 years ago
- hybrid assembly pipeline for bacterial genomes☆596Updated 9 months ago
- Rapid haploid variant calling and core genome alignment☆509Updated 9 months ago
- A complete pipeline for metagenomic analysis☆404Updated last week
- De novo assembler for single molecule sequencing reads using repeat graphs☆825Updated 7 months ago
- (Not Offical) BBMap short read aligner, and other bioinformatic tools.☆226Updated 4 years ago
- ATLAS - Three commands to start analyzing your metagenome data☆386Updated last month
- Transcript assembly and quantification for RNA-Seq☆433Updated last week
- Genome assembly evaluation tool☆429Updated 5 months ago
- MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data☆335Updated last week
- TransDecoder source☆288Updated 6 months ago
- Gene cluster comparison figure generator☆567Updated 5 months ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆362Updated this week
- Rapid prokaryotic genome annotation☆889Updated last year
- A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV☆409Updated last week
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆499Updated last week
- A single molecule sequence assembler for genomes large and small.☆674Updated 2 weeks ago