bxlab / metaWRAP
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
☆419Updated last year
Alternatives and similar repositories for metaWRAP:
Users that are interested in metaWRAP are comparing it to the libraries listed below
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆370Updated 8 months ago
- MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data☆338Updated last week
- A complete pipeline for metagenomic analysis☆405Updated last week
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆337Updated last year
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆505Updated last month
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆308Updated 2 months ago
- (Not Offical) BBMap short read aligner, and other bioinformatic tools.☆227Updated 4 years ago
- Mass screening of contigs for antimicrobial and virulence genes☆408Updated last year
- Rapid large-scale prokaryote pan genome analysis☆344Updated 3 years ago
- Fast genome-wide functional annotation through orthology assignment☆614Updated 11 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆247Updated 5 months ago
- Code, unit tests, and tutorials for running PICRUSt2☆346Updated 3 weeks ago
- bioBakery tools for meta'omic profiling☆274Updated last month
- NCBI Prokaryotic Genome Annotation Pipeline☆335Updated this week
- ☆242Updated 11 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆320Updated 11 months ago
- TransDecoder source☆288Updated 7 months ago
- Eukaryotic Genome Annotation Pipeline