hyattpd / ProdigalLinks
Prodigal Gene Prediction Software
☆490Updated last year
Alternatives and similar repositories for Prodigal
Users that are interested in Prodigal are comparing it to the libraries listed below
Sorting:
- Fast genome-wide functional annotation through orthology assignment☆628Updated last week
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆530Updated this week
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆411Updated 5 months ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆376Updated 2 weeks ago
- Eukaryotic Genome Annotation Pipeline☆355Updated last month
- hybrid assembly pipeline for bacterial genomes☆601Updated 11 months ago
- Rapid prokaryotic genome annotation☆906Updated last year
- NCBI Prokaryotic Genome Annotation Pipeline☆339Updated 2 weeks ago
- Rapid large-scale prokaryote pan genome analysis☆351Updated 3 years ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆846Updated last month
- Genome assembly evaluation tool☆441Updated 7 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆422Updated last year
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆426Updated last year
- Mummer alignment tool☆516Updated 4 months ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆372Updated 2 weeks ago
- Phylogenetic orthology inference for comparative genomics☆778Updated 8 months ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆514Updated last year
- ATLAS - Three commands to start analyzing your metagenome data☆393Updated last month
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆643Updated 3 months ago
- Gene cluster comparison figure generator☆582Updated 7 months ago
- Sequence correction provided by ONT Research☆463Updated last month
- A complete pipeline for metagenomic analysis☆417Updated last week
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆528Updated 2 weeks ago
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆343Updated last year
- antiSMASH☆214Updated last week
- A flexible pipeline for complete analysis of bacterial genomes☆461Updated last month
- adapter trimmer for Oxford Nanopore reads☆365Updated last year
- MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data☆349Updated last week
- Genome-scale protein function classification☆334Updated this week
- Rapid comparison and dereplication of genomes☆299Updated 2 weeks ago