hyattpd / ProdigalLinks
Prodigal Gene Prediction Software
☆502Updated last year
Alternatives and similar repositories for Prodigal
Users that are interested in Prodigal are comparing it to the libraries listed below
Sorting:
- Fast genome-wide functional annotation through orthology assignment☆649Updated 3 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆549Updated 3 weeks ago
- Gene cluster comparison figure generator☆608Updated 9 months ago
- Rapid prokaryotic genome annotation☆932Updated last year
- Mass screening of contigs for antimicrobial and virulence genes☆435Updated last year
- A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV☆434Updated 4 months ago
- Phylogenetic orthology inference for comparative genomics☆795Updated 2 months ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆384Updated this week
- NCBI Prokaryotic Genome Annotation Pipeline☆354Updated 2 weeks ago
- Genome assembly evaluation tool☆464Updated 10 months ago
- Eukaryotic Genome Annotation Pipeline☆362Updated 2 months ago
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆541Updated last week
- MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data☆364Updated last week
- De novo assembler for single molecule sequencing reads using repeat graphs☆868Updated 4 months ago
- Genome-scale protein function classification☆346Updated last week
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆423Updated 7 months ago
- hybrid assembly pipeline for bacterial genomes☆612Updated last year
- Rapid large-scale prokaryote pan genome analysis☆354Updated 3 years ago
- Rapid haploid variant calling and core genome alignment☆542Updated last year
- Mummer alignment tool☆524Updated 7 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆441Updated 2 years ago
- A flexible pipeline for complete analysis of bacterial genomes☆472Updated last week
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆384Updated 3 months ago
- The second version of the Kraken taxonomic sequence classification system☆823Updated 2 weeks ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆303Updated 4 months ago
- ☆266Updated 3 weeks ago
- A complete pipeline for metagenomic analysis☆427Updated 2 weeks ago
- ATLAS - Three commands to start analyzing your metagenome data☆399Updated last week
- Fast Whole-Genome Similarity (ANI) Estimation☆427Updated last month
- Sequence correction provided by ONT Research☆480Updated last month