informationsea / transannoLinks
accurate LiftOver tool for new genome assemblies
☆137Updated last year
Alternatives and similar repositories for transanno
Users that are interested in transanno are comparing it to the libraries listed below
Sorting:
- Tandem repeat genotyping and visualization from PacBio HiFi data☆128Updated last week
- Pangenome-based genome inference☆149Updated last week
- Dfam Transposable Element Tools Docker container.☆101Updated 2 weeks ago
- An ultra-fast and efficient genomic tool for coverage calculation☆161Updated 7 months ago
- Phased assembly variant caller☆129Updated 11 months ago
- source code for EVM☆118Updated 11 months ago
- Structural Variant Identification Method using Long Reads☆178Updated 4 years ago
- Constructing a pangenome gene graph☆198Updated 3 months ago
- Collection of tools for the analysis of CpG data☆97Updated 4 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated last month
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆111Updated 2 months ago
- A list of software for pangenomics☆142Updated 2 weeks ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- A complete diploid human genome☆137Updated last month
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 5 months ago
- Jasmine: SV Merging Across Samples☆230Updated 11 months ago
- Tools for plotting methylation data in various ways☆164Updated this week
- Yet another k-mer analyzer☆151Updated last month
- A tool for somatic structural variant calling using long reads☆150Updated last month
- ☆119Updated 2 weeks ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆176Updated last year
- Hierarchical Alignment Format☆173Updated 2 months ago
- Make colorful identity heatmaps of genomic sequence☆125Updated last year
- Research release basecalling models and configurations☆116Updated 5 months ago
- Fast and accurate coordinate conversion between assemblies☆117Updated last month
- Tandem repeat expansion detection or genotyping from long-read alignments☆130Updated 2 months ago
- Structural Variant Identification Method using Genome Assemblies☆127Updated 3 years ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆164Updated last week
- pbsv - PacBio structural variant (SV) calling and analysis tools☆160Updated 8 months ago