LingbinNi / soybean_pan-3D_genome_analysisLinks
Pan-3D genome analysis of soybean Hi-C data
☆12Updated 2 years ago
Alternatives and similar repositories for soybean_pan-3D_genome_analysis
Users that are interested in soybean_pan-3D_genome_analysis are comparing it to the libraries listed below
Sorting:
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 3 months ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆12Updated 10 months ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 3 years ago
- ☆12Updated 2 years ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆24Updated last month
- ☆15Updated 3 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Updated 10 months ago
- Invertory of TE-gene isoforms☆13Updated 2 years ago
- ☆16Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- several scripts for bioinformatics☆23Updated 2 months ago
- ☆27Updated 2 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated last month
- ☆14Updated last year
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆19Updated 2 months ago
- Bash scripts and data used in pantranscriptomic paper☆24Updated 2 years ago
- ☆15Updated last year
- Characterization of Structural Variation in Chinese samples☆18Updated 3 years ago
- ☆24Updated last year
- ☆10Updated last year
- conserved non-coding sequence☆14Updated 3 years ago
- ☆27Updated 3 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆18Updated 4 months ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13Updated last week
- Long Read Based SV Calling Tools Analysis☆14Updated last year