zhouyflab / PN40024_T2T_Genome
The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding
☆14Updated last week
Alternatives and similar repositories for PN40024_T2T_Genome:
Users that are interested in PN40024_T2T_Genome are comparing it to the libraries listed below
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆27Updated last month
- Dynamic Elongation of a Genome Assembly Path☆21Updated 9 months ago
- Genome haplotype assembly and assessment method☆12Updated last year
- ☆22Updated 2 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆34Updated last month
- A tool for performing collinearity-incorporating homology inference☆28Updated last year
- ☆20Updated 6 months ago
- ☆28Updated 5 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆25Updated 6 months ago
- ☆27Updated 2 years ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- scripts☆15Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 3 months ago
- ☆21Updated 11 months ago
- ☆20Updated last year
- This is a method to find telomeres and centromeres in plants.☆37Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 7 months ago
- ☆25Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆17Updated last year
- ☆15Updated 3 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 8 months ago
- ☆39Updated 2 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆24Updated 3 weeks ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated 11 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 3 years ago
- ☆23Updated last year
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆21Updated last year
- Automated pipeline for running CoalHMM☆12Updated last year
- ☆29Updated last month