tseemann / barrnapView external linksLinks
Bacterial ribosomal RNA predictor
☆280Jan 10, 2026Updated last month
Alternatives and similar repositories for barrnap
Users that are interested in barrnap are comparing it to the libraries listed below
Sorting:
- Rapid prokaryotic genome annotation☆955Jan 6, 2026Updated last month
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆401Jun 12, 2025Updated 8 months ago
- CLI tool to annotate genes with KOfam☆88Jun 6, 2023Updated 2 years ago
- Rapid comparison and dereplication of genomes☆326Nov 10, 2025Updated 3 months ago
- Fast Whole-Genome Similarity (ANI) Estimation☆447Dec 16, 2025Updated last month
- geNomad: Identification of mobile genetic elements☆286Nov 10, 2025Updated 3 months ago
- Prodigal Gene Prediction Software☆524Jan 23, 2024Updated 2 years ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆248Mar 20, 2025Updated 10 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆475Jan 31, 2026Updated 2 weeks ago
- Pilon is an automated genome assembly improvement and variant detection tool☆376Apr 10, 2022Updated 3 years ago
- hybrid assembly pipeline for bacterial genomes☆632Jul 25, 2024Updated last year
- SortMeRNA: next-generation sequence filtering and alignment tool☆287Aug 18, 2025Updated 5 months ago
- Fast genome-wide functional annotation through orthology assignment☆700Jun 18, 2025Updated 7 months ago
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆574Updated this week
- Rapid large-scale prokaryote pan genome analysis☆369Nov 3, 2025Updated 3 months ago
- Read alignment statistics for metagenomics☆387Jan 16, 2026Updated 3 weeks ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆606Updated this week
- customizable pipeline to identify viral sequences from (meta)genomic data☆279Nov 28, 2024Updated last year
- Fast genome and metagenome distance estimation using MinHash☆434Sep 19, 2025Updated 4 months ago
- Bioinformatics program inStrain☆181May 9, 2025Updated 9 months ago
- DAS Tool☆169May 2, 2024Updated last year
- SPAdes Genome Assembler☆905Feb 2, 2026Updated last week
- A tool to circularize genome assemblies☆252Apr 6, 2024Updated last year
- Pairwise SNP distance matrix from a FASTA sequence alignment☆151Dec 31, 2025Updated last month
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆350Jan 31, 2026Updated last week
- Genome assembly evaluation tool☆494Nov 14, 2024Updated last year
- An updated pipeline for pangenome investigation☆341Jan 15, 2026Updated 3 weeks ago
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆319Feb 3, 2026Updated last week
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆459Jul 28, 2023Updated 2 years ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆176Jan 7, 2026Updated last month
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆248Updated this week
- DDBJ Fast Annotation and Submission Tool☆84Feb 4, 2026Updated last week
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆252Dec 13, 2025Updated 2 months ago
- Genome annotation with AUGUSTUS☆327Aug 15, 2025Updated 5 months ago
- Mummer alignment tool☆548Feb 4, 2025Updated last year
- Accelerated BLAST compatible local sequence aligner.☆1,239Updated this week
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆403Jan 12, 2026Updated last month
- NCBI Prokaryotic Genome Annotation Pipeline☆366Feb 6, 2026Updated last week
- Antimicrobial Resistance Identification By Assembly☆184Oct 12, 2023Updated 2 years ago