Microbial RNA annotation
☆306Apr 12, 2026Updated 3 months ago
Alternatives and similar repositories for barrnap
Users that are interested in barrnap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rapid prokaryotic genome annotation☆993Jan 6, 2026Updated 6 months ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆410Mar 2, 2026Updated 4 months ago
- Fast Whole-Genome Similarity (ANI) Estimation☆474Dec 16, 2025Updated 7 months ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆273Mar 20, 2025Updated last year
- Prodigal Gene Prediction Software☆550Jan 23, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆616May 20, 2026Updated 2 months ago
- SortMeRNA: next-generation sequence filtering and alignment tool☆297Jul 8, 2026Updated 3 weeks ago
- Rapid comparison and dereplication of genomes☆349Jul 16, 2026Updated last week
- CLI tool to annotate genes with KOfam☆103Jun 6, 2023Updated 3 years ago
- geNomad: Identification of mobile genetic elements☆325Mar 29, 2026Updated 4 months ago
- Fast genome-wide functional annotation through orthology assignment☆758May 22, 2026Updated 2 months ago
- Read alignment statistics for metagenomics☆402Jul 10, 2026Updated 2 weeks ago
- hybrid assembly pipeline for bacterial genomes☆648Updated this week
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆664Jul 10, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Mass screening of contigs for antimicrobial and virulence genes☆502Jul 17, 2026Updated last week
- Pilon is an automated genome assembly improvement and variant detection tool☆384Apr 10, 2022Updated 4 years ago
- SPAdes Genome Assembler☆954Jun 16, 2026Updated last month
- Fast genome and metagenome distance estimation using MinHash☆448Sep 19, 2025Updated 10 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆475Jul 28, 2023Updated 3 years ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆189Mar 17, 2026Updated 4 months ago
- DAS Tool☆177May 2, 2024Updated 2 years ago
- A tool to circularize genome assemblies☆257Apr 6, 2024Updated 2 years ago
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆335Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Python package for detection of chimerism and contamination in prokaryotic genomes.☆93May 11, 2026Updated 2 months ago
- Rapid large-scale prokaryote pan genome analysis☆378Nov 3, 2025Updated 8 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆296Nov 28, 2024Updated last year
- Genome assembly evaluation tool☆518Jun 10, 2026Updated last month
- DDBJ Fast Annotation and Submission Tool☆87Jul 22, 2026Updated last week
- Bioinformatics program inStrain☆191Mar 12, 2026Updated 4 months ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆380Updated this week
- Repository of our application for human-augmented binning☆27Apr 26, 2021Updated 5 years ago
- Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes☆193Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An updated pipeline for pangenome investigation☆367Jul 2, 2026Updated 3 weeks ago
- Genome annotation with AUGUSTUS☆339May 30, 2026Updated last month
- Clustering cONtigs with COverage and ComposiTion☆140Mar 6, 2020Updated 6 years ago
- Mummer alignment tool☆569Feb 4, 2025Updated last year
- Accelerated BLAST compatible local sequence aligner.☆1,314Jul 13, 2026Updated 2 weeks ago
- Application and Python module for average nucleotide identity analyses of microbes.☆218Jul 1, 2025Updated last year
- Pairwise SNP distance matrix from a FASTA sequence alignment☆156Dec 31, 2025Updated 6 months ago