Microbial RNA annotation
☆292Apr 12, 2026Updated 3 weeks ago
Alternatives and similar repositories for barrnap
Users that are interested in barrnap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rapid prokaryotic genome annotation☆976Jan 6, 2026Updated 4 months ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆408Mar 2, 2026Updated 2 months ago
- geNomad: Identification of mobile genetic elements☆304Mar 29, 2026Updated last month
- Fast Whole-Genome Similarity (ANI) Estimation☆458Dec 16, 2025Updated 4 months ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆257Mar 20, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Prodigal Gene Prediction Software☆538Jan 23, 2024Updated 2 years ago
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆597Apr 21, 2026Updated 2 weeks ago
- SortMeRNA: next-generation sequence filtering and alignment tool☆293Apr 30, 2026Updated last week
- Rapid comparison and dereplication of genomes☆336Nov 10, 2025Updated 5 months ago
- CLI tool to annotate genes with KOfam☆94Jun 6, 2023Updated 2 years ago
- Fast genome-wide functional annotation through orthology assignment☆731Updated this week
- Read alignment statistics for metagenomics☆396Apr 8, 2026Updated 3 weeks ago
- Pilon is an automated genome assembly improvement and variant detection tool☆380Apr 10, 2022Updated 4 years ago
- hybrid assembly pipeline for bacterial genomes☆639Jul 25, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆636Feb 18, 2026Updated 2 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆491Apr 3, 2026Updated last month
- SPAdes Genome Assembler☆931Updated this week
- Fast genome and metagenome distance estimation using MinHash☆441Sep 19, 2025Updated 7 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆468Jul 28, 2023Updated 2 years ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆184Mar 17, 2026Updated last month
- Python package for detection of chimerism and contamination in prokaryotic genomes.☆90Mar 12, 2026Updated last month
- A tool to circularize genome assemblies☆256Apr 6, 2024Updated 2 years ago
- DAS Tool☆173May 2, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Rapid large-scale prokaryote pan genome analysis☆378Nov 3, 2025Updated 6 months ago
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆332Apr 30, 2026Updated last week
- customizable pipeline to identify viral sequences from (meta)genomic data☆289Nov 28, 2024Updated last year
- Genome assembly evaluation tool☆510Nov 14, 2024Updated last year
- Bioinformatics program inStrain☆185Mar 12, 2026Updated last month
- Repository of our application for human-augmented binning☆27Apr 26, 2021Updated 5 years ago
- DDBJ Fast Annotation and Submission Tool☆85Apr 10, 2026Updated 3 weeks ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆362Mar 29, 2026Updated last month
- Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes☆185Apr 16, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- An updated pipeline for pangenome investigation☆356Apr 22, 2026Updated 2 weeks ago
- Clustering cONtigs with COverage and ComposiTion☆138Mar 6, 2020Updated 6 years ago
- Mummer alignment tool☆558Feb 4, 2025Updated last year
- Accelerated BLAST compatible local sequence aligner.☆1,288Apr 28, 2026Updated last week
- Genome annotation with AUGUSTUS☆329Updated this week
- Application and Python module for average nucleotide identity analyses of microbes.☆216Jul 1, 2025Updated 10 months ago
- Prediction of prophages from bacterial genomes☆83May 1, 2026Updated last week