browning-lab / flareLinks
The flare program performs local ancestry inference
☆40Updated last month
Alternatives and similar repositories for flare
Users that are interested in flare are comparing it to the libraries listed below
Sorting:
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- ☆43Updated 5 months ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆33Updated 6 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Analysis of inference methods on standard population models☆25Updated 3 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Method for dating admixture in ancient DNA specimens☆28Updated 3 years ago
- Module for analysing admixture graphs☆28Updated 7 years ago
- ☆30Updated this week
- A fast, scalable, and accurate local ancestry method.☆101Updated last year
- Workflow for processing Illumina sequencing runs for ancient human DNA☆23Updated 4 years ago
- Population genetic simulations in R 🌍☆60Updated 2 weeks ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 6 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆29Updated 10 months ago
- Experimental EIGENSOFT performance improvements.☆21Updated 10 years ago
- Methods for examining PCA locally along the genome.☆83Updated last year
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆29Updated 4 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- Here we present a method to plot the outputs of RFMIX version 2☆27Updated last year
- deep learning prediction of geographic location from individual genome sequences☆51Updated 7 months ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆88Updated 2 years ago
- A set of tools for modelling ancestry patterns along the genome.☆22Updated this week
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆42Updated last month
- Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies☆16Updated 4 years ago
- R package for pedigree inference based on SNP data☆27Updated 2 weeks ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆37Updated last year
- ☆17Updated 9 years ago