priyamoorjani / DATES
Method for dating admixture in ancient DNA specimens
☆26Updated 3 years ago
Alternatives and similar repositories for DATES:
Users that are interested in DATES are comparing it to the libraries listed below
- Workflow for processing Illumina sequencing runs for ancient human DNA☆20Updated 4 years ago
- ☆43Updated last year
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆17Updated this week
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆57Updated 3 months ago
- ☆18Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- Tools for inference of the DFE with dadi☆14Updated 3 years ago
- Infer demographic history with the Moran model☆47Updated this week
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆48Updated last month
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆30Updated last year
- Short scripts for converting genetic data between formats.☆29Updated 2 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- ☆20Updated 4 years ago
- Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)☆44Updated 5 years ago
- Graph-aware Retrieval of Selective Sweeps☆21Updated 5 months ago
- Methods for examining PCA locally along the genome.☆76Updated 6 months ago
- ☆24Updated 7 years ago
- Software to call ROHs☆16Updated 3 months ago
- Fast inference of fine-scale recombination rates based on fused-LASSO☆47Updated this week
- A workflow for integrating ancient lineages into present-day phylogenies.☆24Updated 5 months ago
- ☆29Updated this week
- Assessing confidence in introgression among four populations☆27Updated 3 years ago
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆46Updated last year
- ☆22Updated 11 months ago
- ☆57Updated 2 years ago