popsim-consortium / analysis
Analysis of inference methods on standard population models
☆25Updated 3 years ago
Alternatives and similar repositories for analysis:
Users that are interested in analysis are comparing it to the libraries listed below
- ☆43Updated last year
- ☆17Updated 9 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆36Updated last year
- ☆29Updated this week
- ☆20Updated 4 years ago
- ☆18Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆28Updated 3 months ago
- Population genetics analyses from NGS data☆25Updated 3 years ago
- Tools for inference of the DFE with dadi☆14Updated 3 years ago
- An R package to detect selection in biological pathways☆14Updated last year
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆20Updated 4 years ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆29Updated 9 months ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆48Updated 2 weeks ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆17Updated last year
- ☆11Updated 2 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆24Updated 5 years ago
- an R package for admixture analyses☆16Updated 9 years ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- microhaplotype visualizer and analyzer☆18Updated 3 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆56Updated 3 months ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated this week
- Genome-wide de novo genotyping with 2bRAD☆22Updated 3 months ago
- Genealogical Estimation of Variant Age (GEVA)☆27Updated 3 years ago