Inference of population structure from time-series genotype data
☆15Jul 9, 2019Updated 7 years ago
Alternatives and similar repositories for dystruct
Users that are interested in dystruct are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆25Mar 17, 2026Updated 7 months ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 13 years ago
- Short scripts for converting genetic data between formats.☆31Nov 11, 2022Updated 3 years ago
- A toolbox for C++ devs wanting to build geospatial population genetics simulators !☆11May 4, 2025Updated last year
- Method for dating admixture in ancient DNA specimens☆34Jan 12, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Aug 18, 2023Updated 3 years ago
- ☆30Oct 14, 2022Updated 4 years ago
- A course with Jupyter Notebooks for Computational Population Genetics☆10Sep 4, 2022Updated 4 years ago
- CoalHMM☆23Nov 4, 2013Updated 12 years ago
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- Tools test whether admixture occurred and more☆236Jul 13, 2026Updated 3 months ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated last year
- Estimating Effective Migration Surfaces☆112Oct 28, 2023Updated 3 years ago
- ☆15Jul 17, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Sep 1, 2022Updated 4 years ago
- Estimating evolutionary coevality☆11Jul 16, 2026Updated 3 months ago
- ☆22Jan 11, 2024Updated 2 years ago
- A package for population structure inference from RAD-seq data☆36May 14, 2021Updated 5 years ago
- ☆13Oct 19, 2023Updated 3 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14May 1, 2023Updated 3 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 3 years ago
- ☆52May 12, 2026Updated 5 months ago
- Fast analysis and visualization of latent clusters in population genetic data☆77Mar 29, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- fwdpp is a C++ template library for implementing efficient forward-time population genetic simulations☆28Oct 7, 2021Updated 5 years ago
- Code repository for the HAYSTAC pipeline☆18Oct 25, 2024Updated 2 years ago
- Yleaf software for human Y-chromosomal haplogroup inference from next generation sequencing data☆40Updated this week
- Module for analysing admixture graphs☆30Apr 30, 2018Updated 8 years ago
- Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletion…☆26Apr 25, 2018Updated 8 years ago
- An R package to detect selection in biological pathways☆14Jan 19, 2024Updated 2 years ago
- Genome Analysis Workshop (Jena 2016) material☆18Aug 14, 2026Updated 2 months ago
- A method to improve mappings on circular genomes, using the BWA mapper☆11Mar 4, 2022Updated 4 years ago
- Detect recombination hotspots using population genetic data.☆17Jun 10, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Repo to analyze population genetic data with many different methods☆15Oct 23, 2019Updated 7 years ago
- Pedigree simulator☆34Aug 1, 2026Updated 2 months ago
- A statistical framework for reference-free inference of archaic local ancestry☆15Nov 8, 2019Updated 6 years ago
- R Package - Spatiotemporal Ancestry Interpolation and Search☆10Jun 28, 2025Updated last year
- Process MS results in R, in a tidy way☆16May 25, 2018Updated 8 years ago
- Software to call ROHs☆21Aug 26, 2026Updated 2 months ago
- FermiKit small variant calls for public SGDP samples☆17Sep 22, 2016Updated 10 years ago