bodkan / admixrView external linksLinks
An R interface for the ADMIXTOOLS software
☆34Nov 24, 2025Updated 2 months ago
Alternatives and similar repositories for admixr
Users that are interested in admixr are comparing it to the libraries listed below
Sorting:
- Population genetic simulations in R☆63Jan 28, 2026Updated 2 weeks ago
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 7 years ago
- ☆15Mar 20, 2023Updated 2 years ago
- Tools test whether admixture occurred and more☆219Sep 6, 2024Updated last year
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Jan 28, 2026Updated 2 weeks ago
- ☆95Jun 7, 2025Updated 8 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Sep 17, 2020Updated 5 years ago
- Short scripts for converting genetic data between formats.☆30Nov 11, 2022Updated 3 years ago
- ☆32Nov 11, 2025Updated 3 months ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Jan 20, 2025Updated last year
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 6 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- ☆11Oct 23, 2019Updated 6 years ago
- Tutorial for visualising admixture on a map☆24Jan 4, 2021Updated 5 years ago
- Sweep Inference Framework (controlling for correlation)☆28Jul 10, 2024Updated last year
- ☆14Jan 25, 2024Updated 2 years ago
- R Port of psmc☆17Mar 16, 2023Updated 2 years ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated 10 months ago
- A library of standard population genetic models☆139Updated this week
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 2 years ago
- Scripts used in the annotation of B10K genomes☆15Jun 1, 2020Updated 5 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- Bayesian hierarchical model for complex trait analysis☆46Feb 17, 2024Updated last year
- ☆31Jan 29, 2026Updated 2 weeks ago
- deep learning prediction of geographic location from individual genome sequences☆52Jan 20, 2025Updated last year
- Tools and Utilities for msmc and msmc2☆50Jan 23, 2026Updated 3 weeks ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 4 years ago
- ☆34Dec 28, 2021Updated 4 years ago
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆47Nov 13, 2023Updated 2 years ago
- ☆16Oct 16, 2017Updated 8 years ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 5 years ago
- A package for population structure inference from RAD-seq data☆34May 14, 2021Updated 4 years ago
- Methods for examining PCA locally along the genome.☆88Aug 13, 2024Updated last year
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆183Dec 19, 2024Updated last year
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated 2 weeks ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago