Alternatives and similar repositories for admixr

Users that are interested in admixr are comparing it to the libraries listed below

• hemstrow / snpR
  ☆30Updated last month
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year
• ANGSD / NgsRelate
  ☆43Updated 4 months ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 7 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆41Updated 9 months ago
• bodkan / slendr
  Population genetic simulations in R 🌍
  ☆59Updated last week
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• popsim-consortium / analysis
  Analysis of inference methods on standard population models
  ☆25Updated 3 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆29Updated 4 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 3 years ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 4 months ago
• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆21Updated 11 months ago
• danjlawson / badMIXTURE
  R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes
  ☆25Updated 5 years ago
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 2 years ago
• martinsikora / admixr
  an R package for admixture analyses
  ☆17Updated 10 years ago
• evolgenomics / haplotagging
  Code and binaries related to processing haplotagging data
  ☆15Updated 3 years ago
• MerrimanLab / selectionTools
  Pipeline to take VCF through to Selection Analysis.
  ☆58Updated 2 years ago
• gbradburd / SpaceMix
  ☆30Updated 2 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆33Updated 4 years ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆19Updated 7 years ago
• ngthomas / microhaplot
  microhaplotype visualizer and analyzer
  ☆19Updated 4 years ago
• rwdavies / QUILT
  QUILT: Low coverage whole genome sequence imputation with large reference panels
  ☆64Updated last week
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated last week
• fgvieira / ngsF-HMM
  Estimation of per-individual inbreeding tracts under a probabilistic framework
  ☆14Updated last year
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• DReichLab / adna-workflow
  Workflow for processing Illumina sequencing runs for ancient human DNA
  ☆22Updated 4 years ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 9 years ago
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆60Updated 8 months ago
• regevs / gamma_smc
  ☆20Updated last year
• laurabenestan / RDA_outlier
  Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…
  ☆8Updated 5 years ago