bodkan / admixr
An R package for reproducible and automated ADMIXTOOLS analyses
☆29Updated 2 months ago
Alternatives and similar repositories for admixr:
Users that are interested in admixr are comparing it to the libraries listed below
- ☆43Updated last month
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 7 months ago
- ☆30Updated last week
- Module for analysing admixture graphs☆28Updated 6 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- an R package for admixture analyses☆17Updated 9 years ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆30Updated last month
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 4 years ago
- ☆17Updated 9 years ago
- BITE: BioInformatics tools for everyone☆19Updated 9 months ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆18Updated last month
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- R package for pedigree inference based on SNP data☆26Updated 10 months ago
- Population assignment analysis using R☆17Updated 3 weeks ago
- Two locus likelihoods and ARGs under changing population size☆14Updated 3 weeks ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆14Updated last year
- Repository for speciation genomics website☆25Updated 9 months ago
- ☆18Updated last year
- Analysis of inference methods on standard population models☆25Updated 3 years ago
- ☆30Updated 2 years ago
- Fast and simple simulation-based population genetic inference in R☆27Updated last month
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago