bodkan / admixr
An R package for reproducible and automated ADMIXTOOLS analyses
☆29Updated last month
Alternatives and similar repositories for admixr:
Users that are interested in admixr are comparing it to the libraries listed below
- ☆43Updated 2 weeks ago
- an R package for admixture analyses☆17Updated 9 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 4 years ago
- ☆17Updated 9 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- ☆30Updated 3 weeks ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 6 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆37Updated last year
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆13Updated last year
- BITE: BioInformatics tools for everyone☆19Updated 8 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆28Updated 3 weeks ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆25Updated 3 weeks ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- microhaplotype visualizer and analyzer☆18Updated 3 years ago
- Analysis of inference methods on standard population models☆25Updated 3 years ago
- R Package for performing Qst-Fst analyses☆21Updated 7 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- R package for pedigree inference based on SNP data☆26Updated 9 months ago
- An R package to help in plotting PCA results nicely.☆13Updated 5 years ago
- ☆30Updated 2 years ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆18Updated last month
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆15Updated 3 years ago
- Two locus likelihoods and ARGs under changing population size☆13Updated 2 weeks ago
- DPPDIV☆12Updated 4 years ago
- Genetic Map Comparison☆20Updated 2 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago