Tools test whether admixture occurred and more
☆230May 5, 2026Updated last month
Alternatives and similar repositories for AdmixTools
Users that are interested in AdmixTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- SMC++ infers population history from whole-genome sequence data.☆176Jan 20, 2024Updated 2 years ago
- Eigen tools by Nick Patterson and Alkes Price lab☆203Nov 3, 2023Updated 2 years ago
- ☆97Updated this week
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆89Jun 14, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Haplotype based scans for selection☆148Updated this week
- An R interface for the ADMIXTOOLS software☆37Nov 24, 2025Updated 6 months ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆190Dec 19, 2024Updated last year
- ☆52May 12, 2026Updated 3 weeks ago
- Tutorial on using popular tools for learning about population history☆56Jul 18, 2018Updated 7 years ago
- Program for analysing NGS data.☆260Mar 6, 2025Updated last year
- Estimating Effective Migration Surfaces☆111Oct 28, 2023Updated 2 years ago
- General tools for genomic analyses.☆391Mar 25, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 5 years ago
- Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.☆15May 9, 2019Updated 7 years ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆208Aug 15, 2024Updated last year
- Population genetic simulations in R☆63Apr 24, 2026Updated last month
- Population genetic summary statistics☆40Sep 28, 2023Updated 2 years ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Apr 27, 2021Updated 5 years ago
- ☆47May 16, 2026Updated 3 weeks ago
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 6 years ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆151Dec 22, 2025Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated 11 months ago
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 7, 2025Updated 11 months ago
- Genome Analysis Workshop (Jena 2016) material☆18Mar 3, 2017Updated 9 years ago
- Programs to analyse NGS data for population genetics purposes☆181Aug 27, 2024Updated last year
- Topology weighting by iterative sampling of sub-trees☆88Jan 5, 2025Updated last year
- Method for dating admixture in ancient DNA specimens☆33Jan 12, 2022Updated 4 years ago
- Fast analysis and visualization of latent clusters in population genetic data☆78Mar 29, 2022Updated 4 years ago
- Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data☆20Sep 25, 2023Updated 2 years ago
- Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style …☆176Apr 17, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆51Nov 13, 2023Updated 2 years ago
- ☆12Sep 6, 2019Updated 6 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆105Aug 27, 2025Updated 9 months ago
- Quantifying Introgression via Branch Lengths☆57Sep 30, 2022Updated 3 years ago
- A software package for local ancestry inference and haplotype phasing☆45Apr 20, 2023Updated 3 years ago
- Time-stratified f-statistics☆16Aug 1, 2025Updated 10 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆44Nov 13, 2019Updated 6 years ago