Rosemeis / HaploNetLinks
Haplotype and population structure inference using neural networks.
☆27Updated 10 months ago
Alternatives and similar repositories for HaploNet
Users that are interested in HaploNet are comparing it to the libraries listed below
Sorting:
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- R-package: Calculation of haplotype blocks and libraries☆33Updated 2 months ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Genealogical Estimation of Variant Age (GEVA)☆31Updated 4 years ago
- ☆28Updated 2 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Updated 4 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- ☆31Updated 5 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆34Updated 2 years ago
- Upscaling SV detection to a multi-population level.☆22Updated 2 months ago
- ☆42Updated last year
- Sweep Inference Framework (controlling for correlation)☆29Updated last year
- Computational Analysis of Gene Expression Evolution☆43Updated last month
- Identify and annotate TE-mediated insertions in long-read sequence data☆43Updated 3 months ago
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆15Updated 6 months ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆26Updated 6 years ago
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆21Updated last year
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- Transposable Elements MOvement detection using LOng reads☆24Updated 2 months ago
- Compute N50/NG50 and auN/auNG☆32Updated 2 years ago
- Structural variant merging tool☆55Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago