alisi1989 / RFMIX2-Pipeline-to-plotLinks
Here we present a method to plot the outputs of RFMIX version 2
☆29Updated last year
Alternatives and similar repositories for RFMIX2-Pipeline-to-plot
Users that are interested in RFMIX2-Pipeline-to-plot are comparing it to the libraries listed below
Sorting:
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 5 months ago
- Variant annotation and merging pipeline☆41Updated 5 months ago
- Haplotype and population structure inference using neural networks.☆27Updated last year
- MEGAnE☆33Updated 2 years ago
- Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.☆15Updated 2 months ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆33Updated last year
- Structural variant merging tool☆57Updated last year
- Improving gene isoform quantification with miniQuant☆31Updated 2 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆52Updated 9 months ago
- A Snakemake workflow for calling Fiber-seq Inferred Regulatory Elements (FIREs) on single molecules.☆28Updated last month
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- Repository for pipeline code☆26Updated last year
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆45Updated last year
- Genealogical Estimation of Variant Age (GEVA)☆32Updated 4 years ago
- ☆14Updated 2 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- tutorial on pggb☆36Updated 11 months ago
- ☆38Updated 2 years ago
- ☆23Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- ☆24Updated last year
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆35Updated 5 months ago
- A bioinformatics pipeline to phase and impute genetic data☆26Updated last week
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆30Updated 3 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- A software package for local ancestry inference and haplotype phasing☆43Updated 2 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago