Alternatives and similar repositories for RFMIX2-Pipeline-to-plot

Users that are interested in RFMIX2-Pipeline-to-plot are comparing it to the libraries listed below

• Rosemeis / HaploNet
  Haplotype and population structure inference using neural networks.
  ☆27Updated 6 months ago
• DecodeGenetics / svimmer
  Structural variant merging tool
  ☆52Updated 10 months ago
• pkalbers / geva
  Genealogical Estimation of Variant Age (GEVA)
  ☆29Updated 3 years ago
• ywchoi / phasing
  Evaluation of phasing performance
  ☆23Updated 7 years ago
• pangenome / pggb-workshop
  tutorial on pggb
  ☆34Updated 5 months ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆37Updated 3 months ago
• EichlerLab / svpop
  Variant annotation and merging pipeline
  ☆36Updated 3 weeks ago
• rwdavies / QUILT
  QUILT: Low coverage whole genome sequence imputation with large reference panels
  ☆63Updated this week
• ENCODE-DCC / long-read-rna-pipeline
  ENCODE long read RNA-seq pipeline
  ☆48Updated 2 years ago
• JosephLalli / phasing_T2T
  Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.
  ☆13Updated 4 months ago
• schatzlab / crossstitch
  Code for phasing SVs with SNPs
  ☆52Updated 5 years ago
• adamewing / tldr
  Identify and annotate TE-mediated insertions in long-read sequence data
  ☆42Updated last week
• KolmogorovLab / minda
  ☆19Updated 2 months ago
• hall-lab / sv-pipeline
  Pipeline for structural variation detection in cohorts
  ☆49Updated 3 years ago
• xihaoli / STAARpipeline-Tutorial
  The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…
  ☆30Updated 6 months ago
• cortes-ciriano-lab / ReConPlot
  ☆22Updated 6 months ago
• weng-lab / TEMP2
  Algorithm to detect germline and de novo transposon insertions
  ☆28Updated 2 months ago
• AndreasHeger / gat
  Genomic Association Tester
  ☆31Updated 2 years ago
• zeeev / mergeSVcallers
  heuristics to merge structural variant calls in VCF format.
  ☆36Updated 8 years ago
• deLaatLab / pipe4C
  4C-seq processing pipeline
  ☆23Updated 3 months ago
• Popgen48 / scalepopgen
  ☆23Updated last year
• nf-core / phaseimpute
  A bioinformatics pipeline to phase and impute genetic data
  ☆22Updated last week
• hmgu-itg / VCF-liftover
  Liftover VCF files
  ☆18Updated 8 years ago
• LappalainenLab / lorals
  ☆36Updated 2 years ago
• alek0991 / iSAFE
  Pinpoints the mutation favored by selection
  ☆34Updated 3 years ago
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆26Updated 4 months ago
• dixonlab / hic_breakfinder
  ☆37Updated 5 years ago
• Uauy-Lab / WheatHomoeologExpression
  ☆15Updated 5 years ago
• Shians / NanoMethViz
  ☆28Updated last month
• roberta-davidson / ADMIXTURE-smartPCA-PLINK-and-EIGENSOFT
  Scripts and notes on how to analyse ancient DNA genotype data to understand population structure
  ☆34Updated last year