alisi1989 / RFMIX2-Pipeline-to-plotLinks
Here we present a method to plot the outputs of RFMIX version 2
☆26Updated 11 months ago
Alternatives and similar repositories for RFMIX2-Pipeline-to-plot
Users that are interested in RFMIX2-Pipeline-to-plot are comparing it to the libraries listed below
Sorting:
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month
- Variant annotation and merging pipeline☆39Updated 2 weeks ago
- Structural variant merging tool☆53Updated 11 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆43Updated 9 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Transposable Elements MOvement detection using LOng reads☆22Updated 2 weeks ago
- tutorial on pggb☆35Updated 6 months ago
- ☆31Updated 11 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆37Updated last year
- Haplotype and population structure inference using neural networks.☆27Updated 8 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- MEGAnE☆31Updated last year
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆48Updated 5 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated last month
- new repo☆28Updated 4 years ago
- Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions☆31Updated 8 months ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆32Updated 4 years ago
- ☆30Updated this week
- GENE-SWitCH project RNA-Seq analysis pipeline☆28Updated 5 months ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆63Updated this week
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Genealogical Estimation of Variant Age (GEVA)☆29Updated 3 years ago
- Error correction of ONT transcript reads☆58Updated last year
- ☆22Updated 4 years ago
- ☆15Updated 3 years ago