alisi1989 / RFMIX2-Pipeline-to-plotLinks
Here we present a method to plot the outputs of RFMIX version 2
☆28Updated last year
Alternatives and similar repositories for RFMIX2-Pipeline-to-plot
Users that are interested in RFMIX2-Pipeline-to-plot are comparing it to the libraries listed below
Sorting:
- Identify and annotate TE-mediated insertions in long-read sequence data☆45Updated 4 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Variant annotation and merging pipeline☆39Updated 3 months ago
- Haplotype and population structure inference using neural networks.☆27Updated 11 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆44Updated last year
- Structural variant merging tool☆55Updated last year
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- MEGAnE☆33Updated 2 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- ☆82Updated 8 months ago
- Set of tools to manipulate and visualize modified base bam files☆57Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- tutorial on pggb☆36Updated 9 months ago
- ☆13Updated 2 years ago
- Structural variant caller☆55Updated 3 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Updated and optimized fork of BSMAP☆23Updated 4 years ago
- Repository for pipeline code☆26Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆49Updated 8 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- ☆25Updated last year
- Pipeline to identify isoforms from full-length cDNA sequencing data☆25Updated last month
- Genealogical Estimation of Variant Age (GEVA)☆31Updated 4 years ago
- Transposable Elements MOvement detection using LOng reads☆25Updated 3 months ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆19Updated last year
- Improving gene isoform quantification with miniQuant☆29Updated last month
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆31Updated 11 months ago