Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data
☆19Sep 25, 2023Updated 2 years ago
Alternatives and similar repositories for Ancestry_HMM-S
Users that are interested in Ancestry_HMM-S are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicts adaptive introgression using a CNN trained on genotype matrices.☆17Nov 28, 2023Updated 2 years ago
- Recombination Landscape Estimation using Recurrent Neural Networks☆66Updated this week
- Selection outlier scan with population branch statistic☆15Feb 21, 2024Updated 2 years ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Apr 27, 2021Updated 4 years ago
- ☆48Oct 17, 2025Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆12Sep 6, 2019Updated 6 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆40Nov 15, 2023Updated 2 years ago
- Joint inference of heterozygosity rates and runs of homozygosity☆18Dec 12, 2025Updated 3 months ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- Quantifying Introgression via Branch Lengths☆57Sep 30, 2022Updated 3 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Nov 8, 2019Updated 6 years ago
- ArchaicSeeker is a series of software for detecting archaic introgression sequences and reconstructing introgression history. The latest …☆20Aug 6, 2025Updated 7 months ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆15Aug 11, 2023Updated 2 years ago
- Infer the age of ancestral nodes in a tree sequence.☆25Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A software package for local ancestry inference and haplotype phasing☆45Apr 20, 2023Updated 2 years ago
- Topology weighting by iterative sampling of sub-trees☆86Jan 5, 2025Updated last year
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 2 years ago
- ☆31Jan 5, 2023Updated 3 years ago
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Oct 12, 2024Updated last year
- ☆13Mar 7, 2021Updated 5 years ago
- ☆16Jan 6, 2022Updated 4 years ago
- Topology weighting from unphased genotypes of any ploidy☆23Mar 19, 2026Updated last week
- Graph-aware Retrieval of Selective Sweeps☆22Sep 17, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A python implementation of "Risk of non Adaptedness" method (with a bit of R too!)☆10Aug 2, 2021Updated 4 years ago
- ☆34Nov 11, 2025Updated 4 months ago
- ☆15Mar 20, 2023Updated 3 years ago
- Sweep Inference Framework (controlling for correlation)☆28Jul 10, 2024Updated last year
- machine learning applications for dadi☆17Jan 23, 2025Updated last year
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Mar 4, 2026Updated 3 weeks ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Aug 29, 2017Updated 8 years ago
- ☆30Oct 14, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- feature-based deep learning for the identification of selective sweeps☆59Feb 7, 2026Updated last month
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated last year
- Drawing functions for Demes demographic models☆25Mar 23, 2026Updated last week
- Simulation of Epistasis Local adaptation, with Ancestry and Mate choice☆11Apr 22, 2023Updated 2 years ago
- Coalescent Likelihood Under Effects of Selection - Inferring selection & allele frequency trajectories from nucleotide data☆26Jul 8, 2022Updated 3 years ago
- Assessing confidence in introgression among four populations☆28Apr 19, 2021Updated 4 years ago
- ☆19May 27, 2022Updated 3 years ago