Module for analysing admixture graphs
☆29Apr 30, 2018Updated 7 years ago
Alternatives and similar repositories for admixture_graph
Users that are interested in admixture_graph are comparing it to the libraries listed below
Sorting:
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated 8 months ago
- Faster multispecies coalescent inference using multilocus data☆14Aug 13, 2023Updated 2 years ago
- A package for population structure inference from RAD-seq data☆34May 14, 2021Updated 4 years ago
- Tools test whether admixture occurred and more☆220Sep 6, 2024Updated last year
- An R interface for the ADMIXTOOLS software☆35Nov 24, 2025Updated 3 months ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Apr 27, 2021Updated 4 years ago
- BITE: BioInformatics tools for everyone☆21Jul 25, 2024Updated last year
- Genetic Algorithm for Demographic Model Analysis☆54Feb 3, 2026Updated 3 weeks ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- An R Package to build and simulate coalescent models☆20Feb 19, 2026Updated last week
- Tutorial on using popular tools for learning about population history☆53Jul 18, 2018Updated 7 years ago
- ☆24Jun 9, 2017Updated 8 years ago
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆11Oct 8, 2025Updated 4 months ago
- Estimate population history parameters from site pattern frequencies.☆12Dec 2, 2025Updated 2 months ago
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 3 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆185Dec 19, 2024Updated last year
- an R package for admixture analyses☆18May 15, 2015Updated 10 years ago
- ☆44Sep 5, 2023Updated 2 years ago
- ☆33Nov 11, 2025Updated 3 months ago
- A set of tools for modelling ancestry patterns along the genome.☆24Feb 20, 2026Updated last week
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 4 years ago
- Tools for identifying introgressed archaic sequence.☆12Jun 20, 2017Updated 8 years ago
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 10 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14May 1, 2023Updated 2 years ago
- Tools and Utilities for msmc and msmc2☆50Jan 23, 2026Updated last month
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆59Jun 27, 2025Updated 8 months ago
- Infer the age of ancestral nodes in a tree sequence.☆24Feb 3, 2026Updated 3 weeks ago
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 6 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- Linear time detection of Identity by Descent☆13Jul 22, 2011Updated 14 years ago
- Ancestry and Kinship Tools☆70Nov 16, 2022Updated 3 years ago
- The SPrime program identifies variants that are introgressed from archaic populations.☆27May 21, 2022Updated 3 years ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 9 years ago
- ☆15Jul 17, 2019Updated 6 years ago
- Population genetic summary statistics☆40Sep 28, 2023Updated 2 years ago
- Heuristic, parsimony-based ancestral recombination graph inference☆17Aug 25, 2021Updated 4 years ago
- Infer a tree sequence from genetic variation data.☆60Updated this week
- Time-stratified f-statistics☆15Aug 1, 2025Updated 7 months ago
- R Port of psmc☆17Mar 16, 2023Updated 2 years ago