ksiewert / BetaScanLinks
Genome-wide scan for balancing selection using beta statistic
☆29Updated 2 years ago
Alternatives and similar repositories for BetaScan
Users that are interested in BetaScan are comparing it to the libraries listed below
Sorting:
- Likelihood-based Selective Sweep Detection☆40Updated last year
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆15Updated 4 months ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Updated 2 years ago
- ☆13Updated last year
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- ☆31Updated 5 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Updated 5 years ago
- A module for improving the insertion sequences of structural variant calls☆31Updated 4 years ago
- Tools and Utilities for msmc and msmc2☆48Updated 3 weeks ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 months ago
- Infer demographic history with the Moran model☆48Updated 2 months ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- ☆15Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- Haplotype and population structure inference using neural networks.☆27Updated 8 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated 2 years ago
- ☆42Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 6 years ago
- The MafFilter genome alignment processor☆19Updated 3 months ago
- A software package for local ancestry inference and haplotype phasing☆40Updated 2 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- Genealogical Estimation of Variant Age (GEVA)☆30Updated 3 years ago
- ☆24Updated 8 years ago
- ☆37Updated last year
- ☆16Updated 10 months ago