Consensus genome annotation using OMA
☆32Jan 14, 2026Updated 6 months ago
Alternatives and similar repositories for OMAnnotator
Users that are interested in OMAnnotator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆125Updated this week
- A chromosome-level polyploid phasing scaffolding tool☆18Updated this week
- ☆13May 27, 2025Updated last year
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆63May 17, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Tools for working with agp files☆19Jun 26, 2025Updated last year
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 6 months ago
- Improved long-read assembly by preserving contained reads☆30Aug 22, 2024Updated last year
- This is the standalone version of the EviAnn pipeline☆179Updated this week
- Error correction of long reads☆16Jan 30, 2026Updated 6 months ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆61Jul 5, 2026Updated last month
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆18Jul 31, 2026Updated last week
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Convert HAL to VG☆24Jul 30, 2026Updated last week
- adaptive genome assembly using nanopore sequencing☆27Jul 24, 2026Updated 2 weeks ago
- Multi-genome synteny block visualization tool☆63Updated this week
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated 10 months ago
- A chromosomal visualization package for python.☆15Apr 13, 2026Updated 3 months ago
- A genome completeness evaluation tool based on miniprot☆259Jul 29, 2026Updated last week
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- ☆42Oct 6, 2025Updated 10 months ago
- source code for EVM☆126Nov 29, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- FastOMA is a scalable software package to infer orthology relationship.☆102Jul 26, 2026Updated 2 weeks ago
- JTK -- a regional diploid genome assembler☆26Apr 22, 2026Updated 3 months ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆109Jun 25, 2026Updated last month
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Aug 1, 2024Updated 2 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Jul 1, 2026Updated last month
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 3 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Nov 9, 2025Updated 9 months ago
- Long read aligner for cyclic and acyclic pangenome graphs☆41Dec 20, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated last month
- Genome size estimation from long read overlaps☆92Updated this week
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 8 months ago
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated 2 years ago
- Fast and flexible inference of the distribution of fitness effects (DFE).☆17Jul 29, 2026Updated last week
- Robust identification of orthologous Synteny with the Orthology Index☆43Updated this week