☆162Apr 13, 2026Updated 3 months ago
Alternatives and similar repositories for SVbyEye
Users that are interested in SVbyEye are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is the standalone version of the EviAnn pipeline☆175Jun 24, 2026Updated last month
- ☆196Feb 10, 2026Updated 5 months ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆107Jun 25, 2026Updated 3 weeks ago
- ☆32Jun 18, 2026Updated last month
- implicit pangenome graph☆109Jul 8, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- SRF: Satellite Repeat Finder☆106Jan 8, 2024Updated 2 years ago
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 10 months ago
- Whole Genome Alignment Tools☆225Nov 6, 2025Updated 8 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆109Jun 12, 2026Updated last month
- ☆44Dec 29, 2025Updated 6 months ago
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆24Feb 16, 2026Updated 5 months ago
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆257Jul 10, 2026Updated 2 weeks ago
- Make colorful identity heatmaps of genomic sequence☆139May 24, 2024Updated 2 years ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆133Jul 15, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆62May 17, 2026Updated 2 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆45Sep 22, 2025Updated 10 months ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆60Jul 5, 2026Updated 2 weeks ago
- Pairwise whole genome aligner☆243Jul 16, 2026Updated last week
- Synteny and Rearrangement Identifier☆480Jul 1, 2026Updated 3 weeks ago
- Pangenome Mutation-Annotated Networks☆45Jul 14, 2026Updated last week
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆404Apr 22, 2026Updated 3 months ago
- Identification of transposable element families from pangenome polymorphisms☆57Jun 8, 2026Updated last month
- ANI based satellite annotation☆27Jun 9, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆100Jan 28, 2026Updated 5 months ago
- Multi-genome synteny block visualization tool☆63Jul 6, 2026Updated 2 weeks ago
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆42Feb 15, 2025Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆35Sep 11, 2025Updated 10 months ago
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆209Nov 23, 2025Updated 8 months ago
- blastn2dotplots: multiple dot-plot visualizer☆28Sep 15, 2025Updated 10 months ago
- ☆102Apr 22, 2024Updated 2 years ago
- A genome completeness evaluation tool based on miniprot☆254Updated this week
- Whole genome visualization and comparative genomics in R☆24Feb 18, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆42Oct 6, 2025Updated 9 months ago
- Phased assembly variant caller☆142Dec 4, 2024Updated last year
- Jasmine: SV Merging Across Samples☆257Dec 20, 2024Updated last year
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 3 years ago
- ☆45Dec 11, 2025Updated 7 months ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- bioinformatics toolkit in rust☆107Jul 16, 2026Updated last week