YongxinLiu / EasyMetagenome
Easy Metagenome Pipeline
☆425Updated 2 months ago
Alternatives and similar repositories for EasyMetagenome:
Users that are interested in EasyMetagenome are comparing it to the libraries listed below
- Easy Amplicon data analysis pipeline☆287Updated 2 weeks ago
- Using R language in microbiome analysis☆321Updated last year
- QIIME 2中文文档(QIIME 2 Chinese Manual)☆280Updated last year
- Interpretation and visualization of microbiome charts☆459Updated 2 months ago
- Code, unit tests, and tutorials for running PICRUSt2☆346Updated 2 weeks ago
- ☆107Updated 4 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆419Updated last year
- ☆124Updated 3 years ago
- 二代测序数据分析☆362Updated last year
- A complete pipeline for metagenomic analysis☆404Updated last week
- A repository for setting up a RNAseq workflow☆428Updated 8 years ago
- Helper Functions for Interactive Tree Of Life (iTOL)☆169Updated 4 months ago
- Fast genome-wide functional annotation through orthology assignment☆610Updated 11 months ago
- By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline☆324Updated 6 years ago
- Metagenome analysis pipeline☆97Updated 3 years ago
- bioBakery tools for meta'omic profiling☆274Updated 3 weeks ago
- MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data☆335Updated last week
- ☆241Updated 10 months ago
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆443Updated 4 months ago
- Pathogen NGS Documentary☆142Updated last year
- ☆239Updated 5 years ago
- ☆181Updated 7 years ago
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆335Updated last year
- Introduction to Bioinformatics Traning @Medical Ain Shams Research Institute (MASRI) Jan-2025☆10Updated 2 months ago
- HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).☆193Updated 8 months ago
- ☆278Updated 5 years ago
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…☆500Updated last month
- One-step to Cluster and Visualize Gene Expression Matrix☆290Updated last week
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆370Updated 7 months ago
- ☆14Updated 2 months ago