Alternatives and similar repositories for MicrobiomeStatPlot

Users that are interested in MicrobiomeStatPlot are comparing it to the libraries listed below

• YongxinLiu / EasyMetagenome
  Easy Metagenome Pipeline
  ☆451Updated 5 months ago
• YongxinLiu / EasyAmplicon
  Easy Amplicon data analysis pipeline
  ☆306Updated last week
• taowenmicro / EasyMicrobiomeR
  Using R language in microbiome analysis
  ☆331Updated 2 years ago
• YongxinLiu / QIIME2ChineseManual
  QIIME 2中文文档(QIIME 2 Chinese Manual)
  ☆288Updated last year
• picrust / picrust2
  Code, unit tests, and tutorials for running PICRUSt2
  ☆361Updated 3 months ago
• twbattaglia / RNAseq-workflow
  A repository for setting up a RNAseq workflow
  ☆434Updated 8 years ago
• LangilleLab / microbiome_helper
  A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
  ☆449Updated 6 months ago
• Ming-Lian / NGS-analysis
  二代测序数据分析
  ☆371Updated last year
• bxlab / metaWRAP
  MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
  ☆430Updated last year
• jmzeng1314 / NGS-pipeline
  By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
  ☆326Updated 6 years ago
• jtamames / SqueezeMeta
  A complete pipeline for metagenomic analysis
  ☆421Updated last week
• YongxinLiu / Note
  ☆125Updated 3 years ago
• eggnogdb / eggnog-mapper
  Fast genome-wide functional annotation through orthology assignment
  ☆633Updated 3 weeks ago
• davidemms / OrthoFinder
  Phylogenetic orthology inference for comparative genomics
  ☆783Updated this week
• biobakery / biobakery
  bioBakery tools for meta'omic profiling
  ☆283Updated last month
• biobakery / MetaPhlAn
  MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data
  ☆353Updated 3 weeks ago
• YongxinLiu / EasyMicrobiome
  ☆113Updated last week
• emblab-westlake / MbioAssy
  ☆14Updated 3 weeks ago
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆98Updated 3 years ago
• FelixKrueger / TrimGalore
  A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…
  ☆513Updated 4 months ago
• wwood / kingfisher-download
  Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.
  ☆273Updated last month
• NBISweden / AGAT
  Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/
  ☆515Updated last week
• taowenmicro / ggClusterNet
  Microbial ecological network visualization clustering
  ☆121Updated 4 months ago
• mmatschiner / tutorials
  Tutorials on phylogenetic and phylogenomic inference
  ☆386Updated last year
• jmzeng1314 / my_WGCNA
  ☆278Updated 5 years ago
• usadellab / Trimmomatic
  ☆256Updated last year
• indexofire / pathongs
  Pathogen NGS Documentary
  ☆146Updated last year
• s-andrews / FastQC
  A quality control analysis tool for high throughput sequencing data
  ☆517Updated last year
• TransDecoder / TransDecoder
  TransDecoder source
  ☆294Updated 9 months ago
• hbctraining / DGE_workshop
  ☆394Updated 3 years ago