Asa12138 / pctaxLinks
Professional Comprehensive Omics Data Analysis
☆27Updated last month
Alternatives and similar repositories for pctax
Users that are interested in pctax are comparing it to the libraries listed below
Sorting:
- This is the supplementary code for CRC-multi-kingdom☆17Updated 4 years ago
- A shiny package for microbiome functional enrichment analysis☆38Updated last week
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- Analysis framework for integrating gut microbiome and host gene expression data☆34Updated 3 years ago
- 微生信生物☆23Updated 8 months ago
- R package for downstream Microbiome analysis☆30Updated last year
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆17Updated 5 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- Scripts for stat and plot figures in rice microbiome paper☆30Updated last year
- ☆18Updated 2 years ago
- ☆14Updated 3 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆10Updated 7 years ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆14Updated 2 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆33Updated 3 years ago
- R implementation of the LEfSe method☆61Updated 3 weeks ago
- Network analysis for multi-omics☆95Updated last week
- Scripts for reproducing results shown in Gupta VK et al. "A Predictive Index for Health Status using Species-level Gut Microbiome Profili…☆36Updated 5 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆44Updated 5 years ago
- Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat☆46Updated 3 weeks ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆13Updated last month
- ☆58Updated last year
- Scripts for WGCNA network analysis and correlation with microbial taxonomy traits☆19Updated 4 years ago
- ☆19Updated 3 years ago
- A repository for large-scale microbiome datasets, formatted for phyloseq☆39Updated last year
- R package for fetching and parsing data of the Human Microbiome Compendium☆16Updated 10 months ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆59Updated 6 months ago
- ☆28Updated last year
- A manually curated database of human gut metabolic modules.☆17Updated 7 years ago
- ☆24Updated 5 years ago