Asa12138 / pctaxLinks
Professional Comprehensive Omics Data Analysis
☆23Updated 2 months ago
Alternatives and similar repositories for pctax
Users that are interested in pctax are comparing it to the libraries listed below
Sorting:
- This is the supplementary code for CRC-multi-kingdom☆17Updated 3 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 4 months ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆33Updated 3 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated last month
- Batch effects removal for microbiome data via conditional quantile regression☆31Updated 3 years ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 10 months ago
- 微生信生物☆23Updated 5 months ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 2 months ago
- R implementation of the LEfSe method☆59Updated 4 months ago
- Analysis framework for integrating gut microbiome and host gene expression data☆33Updated 3 years ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆12Updated last year
- ☆13Updated 8 months ago
- ☆19Updated 3 years ago
- R package for downstream Microbiome analysis☆30Updated 8 months ago
- ☆57Updated last year
- Scripts for WGCNA network analysis and correlation with microbial taxonomy traits☆19Updated 4 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 5 years ago
- ☆18Updated 2 years ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Updated 2 months ago
- ☆15Updated 2 years ago
- gutSMASH☆55Updated 8 months ago
- A microbiome analysis toolkit for R☆24Updated 2 years ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆12Updated 11 months ago
- ☆19Updated last year
- ☆14Updated 3 years ago
- Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat☆44Updated this week
- A repository for large-scale microbiome datasets, formatted for phyloseq☆38Updated last year
- Network analysis for multi-omics☆78Updated 2 months ago
- R package to predict microbial loads☆16Updated 2 months ago