Professional Comprehensive Omics Data Analysis
☆32Apr 3, 2026Updated 7 months ago
Alternatives and similar repositories for pctax
Users that are interested in pctax are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Useful Utilities for Statistics and Visualization.☆33Jun 26, 2025Updated last year
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆88Apr 28, 2026Updated 6 months ago
- Network analysis for multi-omics☆126May 24, 2026Updated 5 months ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 11 months ago
- R implementation of the LEfSe method☆68Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Traditional Chinese Medicine Data Analysis and Visualization☆21Oct 15, 2026Updated 3 weeks ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated 2 weeks ago
- Code repository accompanying the manuscript, Symbiont loss and gain, rather than co-diversification shapes honeybee gut microbiota divers…☆15Feb 21, 2025Updated last year
- A Swiss-Army-Knife for Bioinformaticians☆15Jul 26, 2026Updated 3 months ago
- ☆25Apr 13, 2026Updated 6 months ago
- AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resis…☆61Updated this week
- ☆15Jan 1, 2026Updated 10 months ago
- ☆19Jun 25, 2025Updated last year
- ☆26Apr 20, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- code repo for mobileOG-db☆52Jul 30, 2026Updated 3 months ago
- This is the supplementary code for CRC-multi-kingdom☆17Nov 8, 2021Updated 4 years ago
- Ying's tools for analysis, with particular focus on microbiome data☆40Oct 27, 2026Updated last week
- ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…☆78Aug 28, 2026Updated 2 months ago
- A shiny package for microbiome functional enrichment analysis☆42Updated this week
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- ☆19Jan 12, 2026Updated 9 months ago
- R codes and data for 'Smoking, Alcohol consumption, and 24 Gastrointestinal Diseases: Mendelian Randomization Analysis'☆10Mar 5, 2023Updated 3 years ago
- Instantaneous Metagenome Taxonomic Profiling with MetaKSSD☆27Nov 3, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 7 years ago
- Targeted Detection and Reconstruction of Plasmids☆22May 7, 2024Updated 2 years ago
- ☆14Dec 19, 2025Updated 10 months ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Apr 30, 2026Updated 6 months ago
- ccfind - circular complete genome finder with clues of terminal redundancy☆16Mar 5, 2026Updated 8 months ago
- ☆22Sep 4, 2024Updated 2 years ago
- Uses cDBG to count unitigs in bacterial populations☆20Feb 15, 2023Updated 3 years ago
- Fast, memory-efficient, and scalable taxonomic and pathway profiling for (pan)genome-resolved metagenomics and metatranscriptomics☆30Oct 26, 2026Updated last week
- The EasyMultiProfiler package aims to offer a user-friendly and efficient multi-omics data analysis tool on the R platform. It facilitate…☆59Sep 16, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package for downstream data analysis of microbiome omics data☆295Oct 20, 2026Updated 2 weeks ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated 4 months ago
- A manually curated database of human gut metabolic modules.☆19Oct 26, 2026Updated last week
- Highly sensitive pathogen detection☆12Oct 5, 2020Updated 6 years ago
- ☆10Jun 9, 2020Updated 6 years ago
- A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.☆28Updated this week
- Papillomavirus genome annotation tool☆10May 2, 2023Updated 3 years ago