☆158Dec 30, 2025Updated 8 months ago
Alternatives and similar repositories for EasyMicrobiome
Users that are interested in EasyMicrobiome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy Amplicon data analysis pipeline☆375Apr 20, 2026Updated 5 months ago
- Easy Metagenome Pipeline☆584Jun 14, 2026Updated 3 months ago
- Using R language in microbiome analysis☆362May 10, 2023Updated 3 years ago
- Interpretation and visualization of microbiome charts☆552Jul 22, 2025Updated last year
- Microbial ecological network visualization clustering☆156Nov 20, 2025Updated 10 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- USEARCH中文帮助文档(USEARCH Chinese manual)☆23Aug 1, 2024Updated 2 years ago
- Metagenome analysis pipeline☆101Jul 26, 2021Updated 5 years ago
- QIIME 2中文文档(QIIME 2 Chinese Manual)☆307Jul 29, 2023Updated 3 years ago
- 微生信生物☆26Mar 17, 2025Updated last year
- An R package for downstream data analysis of microbiome omics data☆293Updated this week
- Statistics and visualization for amplicon data☆74May 21, 2026Updated 4 months ago
- bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validate…☆140Aug 6, 2026Updated last month
- 宏基因组、代谢组和表型信息关联分析☆11Nov 15, 2018Updated 7 years ago
- ☆12Aug 6, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆23Jan 6, 2026Updated 8 months ago
- A companion R package for the MicrobiomeAnalyst web server☆132Updated this week
- A pipeline for nanopore long-read metagenomic analysis.☆61Nov 26, 2025Updated 10 months ago
- Open-source usearch☆143Updated this week
- ☆18Jan 12, 2026Updated 8 months ago
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- ☆118Updated this week
- Download NCBI assembly genomes with ftp. rsync, ascp☆12Aug 2, 2022Updated 4 years ago
- Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.☆155Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year
- ☆91May 22, 2024Updated 2 years ago
- A comprehensive R package for deep mining microbiome☆196Apr 29, 2026Updated 4 months ago
- HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).☆253Updated this week
- Pathogen NGS Documentary☆156Jan 26, 2026Updated 8 months ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Jan 24, 2025Updated last year
- DAS Tool☆176May 2, 2024Updated 2 years ago
- A whole-genome and alignment-free prokaryotic phylogeny tool☆23May 26, 2026Updated 4 months ago
- ggNetView is an R package for network analysis and visualization. It provides flexible and publication-ready tools for exploring complex …☆112Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Visualize microbiome data with black magic ggtree☆68Sep 3, 2020Updated 6 years ago
- Microbiome Protocol eBook related documents and scripts.☆49Jun 11, 2021Updated 5 years ago
- http://huttenhower.sph.harvard.edu/waafle☆24Jun 16, 2026Updated 3 months ago
- Code, unit tests, and tutorials for running PICRUSt2☆398Updated this week
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆466Feb 13, 2026Updated 7 months ago
- 历史文档备份(2023年)☆18Dec 19, 2023Updated 2 years ago
- ☆65Feb 27, 2024Updated 2 years ago