Microbial ecological network visualization clustering
☆148Nov 20, 2025Updated 5 months ago
Alternatives and similar repositories for ggClusterNet
Users that are interested in ggClusterNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy Amplicon data analysis pipeline☆359Apr 20, 2026Updated last week
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year
- Statistics and visualization for amplicon data☆74Apr 25, 2023Updated 3 years ago
- ☆151Dec 30, 2025Updated 4 months ago
- Interpretation and visualization of microbiome charts☆544Jul 22, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research☆103Dec 17, 2025Updated 4 months ago
- LorMe package for R：Lightening One-code Resolving Microbial Ecology Program☆15Jan 13, 2026Updated 3 months ago
- An R package for downstream data analysis of microbiome omics data☆277Updated this week
- R package for microbiome biomarker discovery☆197Feb 19, 2025Updated last year
- Using R language in microbiome analysis☆353May 10, 2023Updated 2 years ago
- ☆15Oct 14, 2023Updated 2 years ago
- EasyStat☆21Jul 31, 2025Updated 9 months ago
- A comprehensive R package for deep mining microbiome☆192Apr 2, 2026Updated last month
- Visualize microbiome data with black magic ggtree☆68Sep 3, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆94Oct 1, 2025Updated 7 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Jun 14, 2025Updated 10 months ago
- Easy Metagenome Pipeline☆541Feb 3, 2026Updated 2 months ago
- High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis☆15Jan 16, 2023Updated 3 years ago
- Code, unit tests, and tutorials for running PICRUSt2☆386Nov 27, 2025Updated 5 months ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆34Aug 16, 2022Updated 3 years ago
- 微生信生物☆24Mar 17, 2025Updated last year
- bioBakery tools for meta'omic profiling☆313Jun 3, 2025Updated 10 months ago
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆460Feb 13, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆29Jul 21, 2022Updated 3 years ago
- ☆89May 22, 2024Updated last year
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23Jun 27, 2022Updated 3 years ago
- ☆13Jun 1, 2021Updated 4 years ago
- ☆75Mar 10, 2024Updated 2 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- microbiome R package☆315Aug 19, 2025Updated 8 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆288Nov 28, 2024Updated last year
- Scripts for stat and plot figures in rice microbiome paper☆20May 12, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A companion R package for the MicrobiomeAnalyst web server☆132Updated this week
- MGnify genome analysis pipeline☆110Updated this week
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆52Dec 9, 2021Updated 4 years ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆225Mar 24, 2026Updated last month
- ☆21Feb 13, 2020Updated 6 years ago
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆230Apr 7, 2026Updated 3 weeks ago
- phyloseq R☆12Sep 18, 2019Updated 6 years ago