Microbial ecological network visualization clustering
☆153Nov 20, 2025Updated 8 months ago
Alternatives and similar repositories for ggClusterNet
Users that are interested in ggClusterNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy Amplicon data analysis pipeline☆369Apr 20, 2026Updated 3 months ago
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year
- Interpretation and visualization of microbiome charts☆550Jul 22, 2025Updated 11 months ago
- Statistics and visualization for amplicon data☆74May 21, 2026Updated 2 months ago
- ☆152Dec 30, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R package for downstream data analysis of microbiome omics data☆284Jul 11, 2026Updated last week
- Using R language in microbiome analysis☆359May 10, 2023Updated 3 years ago
- EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research☆108Dec 17, 2025Updated 7 months ago
- R package for microbiome biomarker discovery☆200Feb 19, 2025Updated last year
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆17Updated this week
- EasyStat☆21Jun 11, 2026Updated last month
- ☆15Oct 14, 2023Updated 2 years ago
- Visualize microbiome data with black magic ggtree☆68Sep 3, 2020Updated 5 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆95Oct 1, 2025Updated 9 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A comprehensive R package for deep mining microbiome☆195Apr 29, 2026Updated 2 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Jun 14, 2025Updated last year
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆35Aug 16, 2022Updated 3 years ago
- Code, unit tests, and tutorials for running PICRUSt2☆393Nov 27, 2025Updated 7 months ago
- Easy Metagenome Pipeline☆568Jun 14, 2026Updated last month
- High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis☆15Jan 16, 2023Updated 3 years ago
- 微生信生物☆24Mar 17, 2025Updated last year
- bioBakery tools for meta'omic profiling☆319Updated this week
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆459Feb 13, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆30Jul 21, 2022Updated 4 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- ☆90May 22, 2024Updated 2 years ago
- ☆79Mar 10, 2024Updated 2 years ago
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23May 16, 2026Updated 2 months ago
- microbiome R package☆318May 12, 2026Updated 2 months ago
- ☆20Apr 1, 2025Updated last year
- ☆21Feb 13, 2020Updated 6 years ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆53Dec 9, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆13Jun 1, 2021Updated 5 years ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆295Nov 28, 2024Updated last year
- Transform files to the microtable object with microeco package☆29May 29, 2026Updated last month
- MGnify genome analysis pipeline☆113Updated this week
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆232Apr 29, 2026Updated 2 months ago
- A companion R package for the MicrobiomeAnalyst web server☆133Updated this week
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago