Microbial ecological network visualization clustering
☆155Nov 20, 2025Updated 9 months ago
Alternatives and similar repositories for ggClusterNet
Users that are interested in ggClusterNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy Amplicon data analysis pipeline☆373Apr 20, 2026Updated 4 months ago
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year
- Interpretation and visualization of microbiome charts☆550Jul 22, 2025Updated last year
- Statistics and visualization for amplicon data☆74May 21, 2026Updated 3 months ago
- ☆156Dec 30, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An R package for downstream data analysis of microbiome omics data☆291Jul 28, 2026Updated last month
- EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research☆110Dec 17, 2025Updated 8 months ago
- Using R language in microbiome analysis☆362May 10, 2023Updated 3 years ago
- R package for microbiome biomarker discovery☆201Feb 19, 2025Updated last year
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆18Jul 20, 2026Updated last month
- EasyStat☆21Jun 11, 2026Updated 2 months ago
- ☆15Oct 14, 2023Updated 2 years ago
- Visualize microbiome data with black magic ggtree☆68Sep 3, 2020Updated 5 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆96Oct 1, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A comprehensive R package for deep mining microbiome☆196Apr 29, 2026Updated 4 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Jun 14, 2025Updated last year
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆35Aug 16, 2022Updated 4 years ago
- Code, unit tests, and tutorials for running PICRUSt2☆397Nov 27, 2025Updated 9 months ago
- Easy Metagenome Pipeline☆577Jun 14, 2026Updated 2 months ago
- High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis☆15Jan 16, 2023Updated 3 years ago
- 微生信生物☆25Mar 17, 2025Updated last year
- bioBakery tools for meta'omic profiling☆323Aug 4, 2026Updated 3 weeks ago
- A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.☆462Feb 13, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆30Jul 21, 2022Updated 4 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- ☆91May 22, 2024Updated 2 years ago
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆23May 16, 2026Updated 3 months ago
- microbiome R package☆318May 12, 2026Updated 3 months ago
- ☆21Apr 1, 2025Updated last year
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆53Dec 9, 2021Updated 4 years ago
- ☆13Jun 1, 2021Updated 5 years ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆298Nov 28, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Transform files to the microtable object with microeco package☆29May 29, 2026Updated 3 months ago
- MGnify genome analysis pipeline☆115Updated this week
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆235Aug 12, 2026Updated 2 weeks ago
- A companion R package for the MicrobiomeAnalyst web server☆132Updated this week
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- phyloseq R☆12Sep 18, 2019Updated 6 years ago
- ☆29Jan 16, 2024Updated 2 years ago