Alternatives and similar repositories for ggClusterNet

Users that are interested in ggClusterNet are comparing it to the libraries listed below

• cafferychen777 / ggpicrust2
  Make Picrust2 Output Analysis and Visualization Easier
  ☆138Updated last week
• Mengting-Maggie-Yuan / warming-network-complexity-stability
  Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
  ☆48Updated 3 years ago
• TongZhou2017 / itol.toolkit
  Helper Functions for Interactive Tree Of Life (iTOL)
  ☆171Updated last month
• YongxinLiu / EasyMicrobiome
  ☆111Updated 6 months ago
• YongxinLiu / Note
  ☆124Updated 3 years ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆70Updated 2 years ago
• ChiLiubio / microeco
  An R package for data analysis in microbial community ecology
  ☆232Updated last week
• DaliangNing / iCAMP1
  Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
  ☆78Updated 4 months ago
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆98Updated 3 years ago
• fjossandon / Tax4Fun2
  ☆15Updated 2 years ago
• emblab-westlake / MbioAssy
  ☆14Updated 4 months ago
• YongxinLiu / Amplicon2017
  Data and scripts for amplicon pipeline
  ☆25Updated 6 years ago
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆185Updated 4 months ago
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆190Updated 2 months ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆48Updated 4 years ago
• taowenmicro / EasyStat
  EasyStat
  ☆17Updated 3 years ago
• SegataLab / lefse
  ☆85Updated last year
• taowenmicro / phyloseq_translate
  phyloseq R
  ☆11Updated 5 years ago
• YongxinLiu / Zhang2019NBT
  Scripts for stat and plot figures in rice microbiome paper
  ☆31Updated 8 months ago
• cozygene / FEAST
  Fast expectation maximization for microbial source tracking
  ☆125Updated last year
• Weidong-Chen-Microbial-Ecology / Stochastic-assembly-of-river-microeukaryotes
  ☆14Updated 6 years ago
• UMNFuN / FUNGuild
  FUNGuild: parsing OTUs into functional guilds
  ☆119Updated last year
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆123Updated last month
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆125Updated 3 weeks ago
• YongxinLiu / Zhang2018SCLS
  Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)
  ☆32Updated 6 years ago
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆114Updated 2 months ago
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆53Updated 2 years ago
• songweizhi / Tax4Fun2_short_tutorial
  A short tutorial for Tax4Fun2
  ☆19Updated 10 months ago
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆59Updated 2 months ago
• shuojiao / Community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiome
  ☆21Updated 5 years ago