a user-friendly and flexible pipeline for prokaryote genome analysis
☆69Jul 15, 2026Updated last month
Alternatives and similar repositories for EasyGenome
Users that are interested in EasyGenome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated 9 months ago
- ☆18Aug 14, 2024Updated 2 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 8 months ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆18Jul 15, 2025Updated last year
- This is the source code for ARGs-OAP v2.0 construction☆13Aug 1, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated last year
- ☆20Mar 31, 2025Updated last year
- vaginal microbiota☆13Jan 21, 2025Updated last year
- Easy Metagenome Pipeline☆576Jun 14, 2026Updated 2 months ago
- tandemtwister: Tandem repeat genotyping tool☆19Feb 1, 2026Updated 6 months ago
- Scripts for stat and plot figures in rice microbiome paper☆20May 12, 2019Updated 7 years ago
- MicrobiomeReview☆11Jun 6, 2023Updated 3 years ago
- MicrobeRX☆17Aug 11, 2025Updated last year
- ☆20Mar 29, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 9 years ago
- ☆16Jun 21, 2023Updated 3 years ago
- A tool to assemble high-quality phages from metagenomes.☆24May 22, 2026Updated 2 months ago
- Easy Amplicon data analysis pipeline☆372Apr 20, 2026Updated 3 months ago
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated last year
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆23Mar 20, 2026Updated 4 months ago
- Open Human Genome Library☆67Dec 22, 2025Updated 7 months ago
- ☆22Jan 14, 2024Updated 2 years ago
- ☆22Sep 12, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 3 years ago
- A Docker image to run Stan, cmdstanr, and brms for Bayesian statistical modelling☆21Nov 20, 2024Updated last year
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆23Nov 25, 2025Updated 8 months ago
- MGI sequence platform data multiplexing tool☆12Sep 11, 2019Updated 6 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- R package computes correlation for relative abundances☆13May 22, 2017Updated 9 years ago
- BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding☆14Aug 27, 2025Updated 11 months ago
- ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…☆75Mar 16, 2025Updated last year
- ☆53Nov 24, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Source code and binaries for the SOAP2 alignment tool developed by BGI.☆10Dec 22, 2023Updated 2 years ago
- The analysis pipeline for FLEP-seq☆17Aug 18, 2023Updated 3 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆11Jul 13, 2018Updated 8 years ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated 2 years ago
- Hi-C data processing pipeline☆41Feb 27, 2024Updated 2 years ago
- FOR my learing☆12Feb 19, 2026Updated 6 months ago