a user-friendly and flexible pipeline for prokaryote genome analysis
☆70Sep 29, 2026Updated 2 weeks ago
Alternatives and similar repositories for EasyGenome
Users that are interested in EasyGenome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- vaginal microbiota☆13Jan 21, 2025Updated last year
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated 11 months ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆18Jul 15, 2025Updated last year
- This is the source code for ARGs-OAP v2.0 construction☆13Aug 1, 2019Updated 7 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆18Aug 14, 2024Updated 2 years ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated last year
- Recording personal workflows used in work, study notes, and summaries of various tools and methods.☆11Oct 9, 2025Updated last year
- ☆19Mar 31, 2025Updated last year
- Easy Metagenome Pipeline☆585Jun 14, 2026Updated 4 months ago
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 8 months ago
- Scripts for stat and plot figures in rice microbiome paper☆20May 12, 2019Updated 7 years ago
- MicrobiomeReview☆11Jun 6, 2023Updated 3 years ago
- MicrobeRX☆17Aug 11, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆20Mar 29, 2022Updated 4 years ago
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 9 years ago
- Easy Amplicon data analysis pipeline☆377Apr 20, 2026Updated 5 months ago
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated last year
- ☆16Jun 21, 2023Updated 3 years ago
- Open Human Genome Library☆70Dec 22, 2025Updated 9 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆24Mar 20, 2026Updated 6 months ago
- ☆22Jan 14, 2024Updated 2 years ago
- Tool intended to pull out sequences and annotations between insertion sites specified by the user.☆15Apr 10, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆22Sep 12, 2019Updated 7 years ago
- A tool to assemble high-quality phages from metagenomes.☆28Sep 10, 2026Updated last month
- A Docker image to run Stan, cmdstanr, and brms for Bayesian statistical modelling☆21Nov 20, 2024Updated last year
- MGI sequence platform data multiplexing tool☆12Sep 11, 2019Updated 7 years ago
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆22Nov 25, 2025Updated 10 months ago
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 3 years ago
- R package computes correlation for relative abundances☆13May 22, 2017Updated 9 years ago
- ☆10Jun 9, 2020Updated 6 years ago
- Source code and binaries for the SOAP2 alignment tool developed by BGI.☆10Dec 22, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding☆13Aug 27, 2025Updated last year
- ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…☆75Aug 28, 2026Updated last month
- ☆54Nov 24, 2025Updated 10 months ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- The analysis pipeline for FLEP-seq☆18Aug 18, 2023Updated 3 years ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆59Jun 4, 2025Updated last year