a user-friendly and flexible pipeline for prokaryote genome analysis
☆68Mar 17, 2026Updated 2 months ago
Alternatives and similar repositories for EasyGenome
Users that are interested in EasyGenome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Jun 13, 2025Updated 11 months ago
- Official implementation of paper "Self-Supervised Noise Modeling and Sparsity Guided Cryo-ET Image Denoising" published on Ultramicroscop…☆16Sep 10, 2024Updated last year
- A Qiime plugin for MICOM.☆10May 23, 2026Updated last week
- MicrobiomeReview☆11Jun 6, 2023Updated 2 years ago
- vaginal microbiota☆13Jan 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated 6 months ago
- ☆20Mar 29, 2022Updated 4 years ago
- ☆30Sep 10, 2024Updated last year
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated 9 months ago
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 9 years ago
- ☆22Sep 12, 2019Updated 6 years ago
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆23Nov 25, 2025Updated 6 months ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆18Jul 15, 2025Updated 10 months ago
- A Docker image to run Stan, cmdstanr, and brms for Bayesian statistical modelling☆21Nov 20, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 6 months ago
- ☆10Mar 11, 2025Updated last year
- Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.☆11May 24, 2024Updated 2 years ago
- An example of continuous integration and deployment of a sphinx project☆13Aug 25, 2023Updated 2 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.☆37Mar 24, 2026Updated 2 months ago
- A QIIME 2 plugin for interaction with the Greengenes2 database☆33Oct 1, 2024Updated last year
- R package to evaluate reproducibility of Hi-C data☆10Mar 16, 2023Updated 3 years ago
- ☆29Jan 16, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- A nextflow pipeline for performing bacterial RNA-Seq data analysis.☆13Apr 26, 2026Updated last month
- Convert GFF file to GenBank file format while extracting the sequences between the annotated regions☆14Sep 6, 2023Updated 2 years ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 5 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- bioinfo workflow based on snakemake☆14Feb 22, 2024Updated 2 years ago
- Feature Aggregate Depth Utility☆12Aug 20, 2024Updated last year
- MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks☆16Jul 26, 2017Updated 8 years ago
- ☆16Aug 14, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated last year
- Spectral and reproducibility analysis of Hi-C contact maps☆13Mar 18, 2021Updated 5 years ago
- Benchmarking different ways of doing read (taxonomic) classification, with a focus on removal of contamination and MTB classification☆14Apr 8, 2024Updated 2 years ago
- Pan-3D genome analysis of soybean Hi-C data☆12Mar 6, 2023Updated 3 years ago
- ☆13Sep 4, 2025Updated 8 months ago
- Tools for DLO HiC data analyze☆16Oct 31, 2022Updated 3 years ago
- ☆13Jul 26, 2022Updated 3 years ago