a user-friendly and flexible pipeline for prokaryote genome analysis
☆70Sep 29, 2026Updated last month
Alternatives and similar repositories for EasyGenome
Users that are interested in EasyGenome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- vaginal microbiota☆13Jan 21, 2025Updated last year
- ☆14Dec 19, 2025Updated 10 months ago
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated last year
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆18Jul 15, 2025Updated last year
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆18Aug 14, 2024Updated 2 years ago
- This is the source code for ARGs-OAP v2.0 construction☆13Aug 1, 2019Updated 7 years ago
- Recording personal workflows used in work, study notes, and summaries of various tools and methods.☆11Oct 9, 2025Updated last year
- ☆19Mar 31, 2025Updated last year
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 11 months ago
- Easy Metagenome Pipeline☆588Updated this week
- ☆54Nov 24, 2025Updated 11 months ago
- Website / continuous DB builds for SingleM☆12Oct 12, 2026Updated 3 weeks ago
- ☆14Mar 21, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts for stat and plot figures in rice microbiome paper☆20May 12, 2019Updated 7 years ago
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 9 months ago
- MicrobiomeReview☆11Jun 6, 2023Updated 3 years ago
- MicrobeRX☆17Aug 11, 2025Updated last year
- Apply AI-based trait prediction from BacDive to your own genomes.☆16Nov 12, 2024Updated last year
- a complete reference book for clusterProfiler and its sub-packages☆16Aug 12, 2021Updated 5 years ago
- ☆16Jun 21, 2023Updated 3 years ago
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated last year
- Scripts and resources for analyzing sequence data for select eco-functional genes☆20May 25, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22Jan 14, 2024Updated 2 years ago
- ☆20Mar 29, 2022Updated 4 years ago
- Easy Amplicon data analysis pipeline☆378Apr 20, 2026Updated 6 months ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆19Apr 3, 2024Updated 2 years ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆24Mar 20, 2026Updated 7 months ago
- ☆10Jun 9, 2020Updated 6 years ago
- R package computes correlation for relative abundances☆13May 22, 2017Updated 9 years ago
- BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding☆13Aug 27, 2025Updated last year
- MGI sequence platform data multiplexing tool☆12Sep 11, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆22Sep 12, 2019Updated 7 years ago
- Effortless, flexible, and powerful job execution engine.☆10Jul 24, 2025Updated last year
- Nested sampling packagin for BEAST☆12Aug 12, 2026Updated 2 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Tool intended to pull out sequences and annotations between insertion sites specified by the user.☆15Apr 10, 2026Updated 6 months ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated last year