YongxinLiu / Liu2020ProteinCellLinks
Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
☆41Updated 5 years ago
Alternatives and similar repositories for Liu2020ProteinCell
Users that are interested in Liu2020ProteinCell are comparing it to the libraries listed below
Sorting:
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 3 weeks ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 8 months ago
- Microbiome Protocol eBook related documents and scripts.☆48Updated 4 years ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆111Updated last year
- ☆45Updated 5 years ago
- Metagenomic sequence data analysis pipeline☆33Updated 2 weeks ago
- Metagenome analysis pipeline☆98Updated 3 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆119Updated last year
- ☆85Updated last year
- Scripts for stat and plot figures in rice microbiome paper☆19Updated 6 years ago
- Metatranscriptomics Tutorial☆62Updated last year
- This is an unofficial repo for Tax4Fun2☆25Updated 3 years ago
- A simple plot library☆52Updated 7 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆32Updated 2 years ago
- Course material for the metagenomics course☆44Updated 3 years ago
- iMeta teaches you to plot☆53Updated 2 years ago
- ☆56Updated last year
- ☆111Updated 7 months ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆47Updated 4 months ago
- ☆27Updated last year
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 6 years ago
- Generating iToL annotations from Spreadsheet or CSV files☆103Updated 5 years ago
- an R/Shiny application for interactive creation of Circos plot☆48Updated 2 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆32Updated 2 years ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆73Updated last week
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆77Updated 4 months ago
- 16s Qiime2 pipeline☆13Updated 6 years ago
- A companion R package for the MicrobiomeAnalyst web server☆125Updated this week
- Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.☆123Updated 3 months ago
- bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validate…☆116Updated 3 weeks ago