wanjinhu / Metagenomic-Analysis-Pipeline
Metagenomic sequence data analysis pipeline
☆28Updated 2 months ago
Alternatives and similar repositories for Metagenomic-Analysis-Pipeline:
Users that are interested in Metagenomic-Analysis-Pipeline are comparing it to the libraries listed below
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 5 months ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆39Updated 4 years ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆67Updated last month
- Metagenome analysis pipeline☆94Updated 3 years ago
- ☆100Updated 2 months ago
- Microbiome Protocol eBook related documents and scripts.☆47Updated 3 years ago
- A companion R package for the MicrobiomeAnalyst web server☆120Updated 2 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆105Updated last year
- Discovering known and novel miRNAs from small RNA sequencing data☆142Updated 5 months ago
- ☆45Updated 5 years ago
- ☆19Updated 5 years ago
- iMeta teaches you to plot☆50Updated last year
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.☆156Updated last month
- This is an unofficial repo for Tax4Fun2☆24Updated 2 years ago
- Go to☆36Updated this week
- RNA-Seq analysis workflow☆104Updated 3 years ago
- Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.☆114Updated last week
- ☆135Updated 5 years ago
- ☆83Updated 9 months ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆115Updated 9 months ago
- A simple plot library☆52Updated 7 years ago
- A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysi…☆131Updated last month
- Pathogen NGS Documentary☆140Updated 10 months ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 4 months ago
- The snakemake analysis workflow for bioinformatics☆23Updated 8 months ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆203Updated 3 months ago
- Make Picrust2 Output Analysis and Visualization Easier☆120Updated 3 weeks ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆61Updated 7 months ago
- Analysis framework for integrating gut microbiome and host gene expression data☆32Updated 2 years ago
- ☆51Updated 6 years ago