Alternatives and similar repositories for Metagenomic-Analysis-Pipeline:

Users that are interested in Metagenomic-Analysis-Pipeline are comparing it to the libraries listed below

• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆41Updated 4 years ago
• GRONINGEN-MICROBIOME-CENTRE / Groningen-Microbiome
  Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…
  ☆57Updated 7 months ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆48Updated 3 years ago
• Asa12138 / ReporterScore
  Generalized Reporter Score-based Functional Enrichment Method for Omics Data
  ☆69Updated last month
• pzweuj / pzweuj.github.io
  Go to
  ☆36Updated 3 weeks ago
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆109Updated last year
• BioOmics / iSeq
  Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
  ☆192Updated last week
• Tong-Chen / s-plot
  A simple plot library
  ☆52Updated 7 years ago
• ShawnWx2019 / WGCNA-shinyApp
  shiny app for WGCNA...
  ☆28Updated 5 months ago
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆97Updated 3 years ago
• Tong-Chen / Bioinfo_course_R
  ☆39Updated last year
• xuzhougeng / R-ChIP-data-analysis
  ☆50Updated 6 years ago
• sjdlabgroup / SAHMI
  ☆78Updated 8 months ago
• YongxinLiu / Zhang2019NBT
  Scripts for stat and plot figures in rice microbiome paper
  ☆31Updated 6 months ago
• iprada / Circle-Map
  A method for circular DNA detection based on probabilistic mapping of ultrashort reads
  ☆63Updated 9 months ago
• wijerasa / Qiime2_Pipeline
  16s Qiime2 pipeline
  ☆13Updated 6 years ago
• shenmengyuan / RNA_seq_Biotrainee
  DEG analysis and KEGG/GO enrichment analysis
  ☆68Updated 7 years ago
• xuzhougeng / org.Osativa.eg.db
  ☆20Updated 5 years ago
• ZihaoShu / Tax4Fun2
  This is an unofficial repo for Tax4Fun2
  ☆25Updated 3 years ago
• YongxinLiu / EasyMicrobiome
  ☆107Updated 5 months ago
• YaoLab-Bioinfo / shinyCircos-V2.0
  an R/Shiny application for interactive creation of Circos plot
  ☆48Updated 2 years ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆71Updated 3 weeks ago
• biobakery / kneaddata
  Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
  ☆117Updated last month
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆147Updated 8 months ago
• al-mcintyre / merip_reanalysis_scripts
  Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
  ☆50Updated 5 years ago
• Lindseynicer / WGCNA_tutorial
  A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
  ☆66Updated 3 years ago
• alexa-kur / miQTL_cookbook
  ☆45Updated 5 years ago
• sib-swiss / first-steps-with-R-training
  repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
  ☆46Updated 3 months ago
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆52Updated 2 years ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆104Updated 3 years ago