Winnie09 / GPTCelltypeLinks
☆210Updated last year
Alternatives and similar repositories for GPTCelltype
Users that are interested in GPTCelltype are comparing it to the libraries listed below
Sorting:
- Analysis of single cell RNA-seq data course☆149Updated 3 years ago
- ☆274Updated 10 months ago
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆213Updated last year
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆230Updated 2 years ago
- ☆172Updated last year
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆231Updated last week
- A tool for semi-automatic cell type classification☆408Updated this week
- Scissor package☆237Updated last year
- A toolkit of spatial transcriptomic analysis.☆261Updated 2 weeks ago
- T/B cell receptor sequencing analysis notes☆265Updated 10 months ago
- A tool for detecting somatic variants in single cell data☆214Updated last year
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆172Updated 6 months ago
- Cell types enrichment analysis☆202Updated last year
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆297Updated 2 months ago
- Single-cell epigenomics analysis tools☆289Updated last month
- Interpretation of cell states using reference single-cell maps☆293Updated last month
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆228Updated 5 months ago
- Single cell RNA sequencing analysis course☆223Updated 2 weeks ago
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆166Updated 2 years ago
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆234Updated 8 months ago
- single cell Flux Estimation Analysis (scFEA) Try the below web server!☆130Updated last year
- Scanpy Tutorials.☆223Updated this week
- Single-cell Transcriptome and Regulome Analysis Pipeline☆292Updated 2 years ago
- scDIOR: Single cell data IO softwaRe☆148Updated 3 years ago
- Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data☆144Updated 2 months ago
- TCR and BCR assembly from RNA-seq data☆326Updated this week
- LIANA+: an all-in-one framework for cell-cell communication☆238Updated this week
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆112Updated last year
- Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey a…☆157Updated last month
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆218Updated 3 months ago