reticulate-free single cell format conversion
☆217Mar 16, 2026Updated last month
Alternatives and similar repositories for schard
Users that are interested in schard are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆99Apr 16, 2026Updated 2 weeks ago
- Methods for detecting doublets in single-cell sequencing data☆246Feb 12, 2026Updated 2 months ago
- A package to help convert different single-cell data formats to each other☆465Feb 20, 2026Updated 2 months ago
- Methods to discover gene programs on single-cell data☆180Apr 1, 2026Updated last month
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆642Mar 11, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆47Jan 28, 2026Updated 3 months ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆297Updated this week
- R package implementation of Milo for testing for differential abundance in KNN graphs☆428Apr 23, 2026Updated last week
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆587Mar 4, 2026Updated last month
- Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data☆430Apr 11, 2026Updated 3 weeks ago
- Conversion between scRNA-seq objects☆206Apr 16, 2026Updated 2 weeks ago
- LIANA: a LIgand-receptor ANalysis frAmework☆239Aug 7, 2024Updated last year
- Scaling Single Cell Analysis to Millions of Cells☆279Apr 9, 2026Updated 3 weeks ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆242Mar 17, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Various utility functions for Seurat v5 single-cell analysis☆66Apr 3, 2026Updated 3 weeks ago
- Fast Wilcoxon and auROC☆207Nov 8, 2024Updated last year
- ☆214Mar 26, 2026Updated last month
- Spot pseudo-Imager on top of histology☆49Dec 12, 2025Updated 4 months ago
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆123Apr 19, 2026Updated last week
- MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell trans…☆185Aug 12, 2025Updated 8 months ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆299Updated this week
- scGSVA: Perform GSVA for single cell RNA seq☆78Mar 1, 2026Updated 2 months ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆323Nov 1, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆49Oct 29, 2025Updated 6 months ago
- Easy single cell analysis platform for enrichment☆223Apr 3, 2026Updated 3 weeks ago
- Python library for plotting Cellphonedb results. Ported from ktplots R package.☆57Updated this week
- R package for detecting doublets in single-cell RNA sequencing data☆545Mar 21, 2025Updated last year
- A tool for semi-automatic cell type classification☆473Mar 21, 2026Updated last month
- Scissor package☆261May 10, 2024Updated last year
- Spatial omics analysis toolbox☆372Apr 24, 2026Updated last week
- Quantifying metabolism activity at the single-cell resolution☆173Feb 18, 2026Updated 2 months ago
- Finding gene expression states in scRNA-seq data☆51Mar 22, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆187Mar 27, 2025Updated last year
- BANKSY: spatial clustering☆141Oct 15, 2025Updated 6 months ago
- Gene group activity utility functions for Scanpy☆101Dec 21, 2024Updated last year
- High dimensional weighted gene co-expression network analysis☆472Mar 13, 2026Updated last month
- ☆183May 6, 2025Updated 11 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆220Mar 2, 2026Updated 2 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆31Jun 19, 2024Updated last year